Clostridium saccharolyticum WM1: Closa_4122
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Entry
Closa_4122 CDS
T01288
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Closa_4122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_4122
Enzymes [BR:
csh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Closa_4122
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Closa_4122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
ADL06629
UniProt:
D9R2K5
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All DBs
Position
complement(4467513..4468268)
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AA seq
251 aa
AA seq
DB search
MKKMISWNVNGLRACVEKGFLDYFKEMDADVFCIQESKLQEGQIDLTLPGYHQYWNYAEK
KGYSGTALFTKEKPLSVAYGINAEEHDREGRVIAAEYPEYYVVTCYTPNSQNELARLPYR
LTWEDAVLAYLKKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREKFTVLLE
SGFIDTYRYFYPEQEGIYSWWSYRFSARKKNAGWRIDYFCVSESLKDRLASAAIHTEVLG
SDHCPVELVIC
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatgatttcctggaatgtaaacggccttcgtgcctgtgtggagaagggattt
ttggattattttaaagagatggatgcagatgtattctgtatccaggaaagcaaactccag
gagggtcagattgatctgactcttcccggataccaccagtattggaattatgcagaaaag
aagggatattccggtaccgcattgtttacaaaggagaagcctttgtcagtggcttatggg
atcaacgcagaggagcatgacagggaaggcagggtaatcgctgccgaatatccggaatat
tatgtggtcacctgttatacccccaattcccagaatgagctggcccgcctgccctaccgg
ctgacgtgggaggatgcggtcctggcctatttaaagaagctggaggagaaaaaaccggtg
attttttgtggagatcttaatgttgcccataaagaaattgatttaaagaatcccaagacc
aaccggaaaaatgcaggttttaccgatgaagagagagagaaattcaccgttcttctggag
agcggcttcattgatacgtaccgctatttctatccggagcaggaaggcatctattcctgg
tggtcctaccggttcagcgccaggaagaaaaacgcaggctggcggattgactatttctgt
gtttcagaaagcttaaaggacaggcttgcctcagcggccatccatacggaggtactgggc
tccgaccactgtcctgttgagcttgtgatctgctag
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