Chryseobacterium shandongense: EG350_00485
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Entry
EG350_00485 CDS
T05920
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
csha
Chryseobacterium shandongense
Pathway
csha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EG350_00485 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csha03400
]
EG350_00485 (mutS)
DNA repair and recombination proteins [BR:
csha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EG350_00485 (mutS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AZA55769
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Position
94105..96693
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AA seq
862 aa
AA seq
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MAKAAKKETPLMTQYNTIKAKYPDALLLFRVGDFYETFGQDAIRTSQILGIVLTKRANGE
GHIELAGFPHHSVDSYLPKLVRAGMRVAICDQLEDPKMVKGIVKRGVTELVTPGVTFNDQ
VLNSKKNNFLLSLHKEKEKFGIALVDISTGEFLVSEGNLEKLLHIVSTFDPSEIIYQRSV
QIPEQLKNRSVFKLEDWAYQYNFAYEKLTNHFKTNSLKGFGIENQQSAITAAGAIFAYLV
EDTHHNLLSHITKIQIIPQEDFLMMDNFTLRNLEIVYPSSAQGKSLLDIIDRTSTPMGGR
LLRRRIILPLKSVNEINRRLSLIDFLNENDHLKYEISQLLKSISDLDRLMGKLAAEKISP
KELGYLRQSLINIHKIKGLLHPHADVLAWLDPLYDQEELIKCLQNHLNDELPVNLAKGNV
IKEGISEELDTLRGLQSKGRGFLDEMCQREIERTGISSLKIDFNNVFGYYIEVRNTHKDK
VPADWLRKQTLVNAERYITEELKEYENQILGAEEKIGVLENQLYRKVCGDTIIYMDQIQQ
NSNIIAQLDVAVGLSELAVSESYTKPVLNESFAIDLKEARHPIIENALPLGEKYIPNDIY
LDKDSQQIIMVTGPNMAGKSAILRQTAIVCLMAQIGSFVPAKYAEIGILDKIFTRVGATD
NISAGESTFMVEMNEAANILNNISERSLILLDEIGRGTSTYDGVSIAWAIAEYLHQHPTQ
AKTLFATHYHELNEMTVNFERVKNFHVSIQENKGNIIFLRKLIPGGSEHSFGIHVAKLAG
MPAKVVNRANEILKTLEASRTQGSSSESIKRVTEENMQLSFFQLDDPVLENIREELTKID
INTLTPIEALMKLNAIKKMIGG
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcagcgaagaaagaaactcctttaatgacacagtacaataccatcaaggcg
aaatatcctgatgcacttttactattcagggtaggagatttttatgaaacgtttggccag
gatgccattagaacatctcagatattaggaattgttctcaccaaaagagccaatggagaa
gggcatattgaactggcgggatttccgcatcattccgtagattcttatttgccgaaactg
gtgagagccggaatgagagtcgccatctgcgatcagctggaagacccgaaaatggtcaaa
ggtattgtaaaaagaggggtaacggaactggttactccgggtgttacgtttaatgaccag
gttcttaattcgaagaagaataactttctgctttcccttcataaagaaaaagaaaaattc
gggattgcgctggtggatatttctaccggtgaatttttggtaagtgaaggaaatctggaa
aagctgcttcatattgtcagtacgtttgatccgagtgaaattatttaccaaaggagtgtt
cagattccagagcagcttaaaaacagaagtgtttttaagctggaagactgggcctatcag
tataattttgcctacgaaaaactgacgaatcattttaaaaccaattcattaaaaggtttt
ggaattgaaaatcagcagtcggctattaccgcagcgggagctatttttgcttatctggtt
gaagatacgcatcacaatttactatctcacattacgaaaattcagattattccgcaggaa
gattttctgatgatggataattttacgctgagaaatcttgaaattgtctatccaagcagt
gcacagggaaaatctttactcgacattatcgacagaacctctacaccaatgggaggaagg
ctgttgagaagaagaattattttaccgctgaagtccgttaatgagatcaacagaaggctt
tccttgattgactttttaaatgaaaatgatcatttgaaatatgaaatttcccaactgcta
aaatctatttcggatcttgaccggctgatgggaaaactggcagcagaaaaaatttccccg
aaagaactgggatatcttcgtcagagtcttattaatattcataaaatcaaaggattgctt
catcctcatgccgatgtgttggcgtggctggatcctttgtatgatcaggaagaattgata
aaatgccttcagaatcatctgaatgatgaattgccggtgaaccttgctaaaggaaatgtg
attaaagaaggaatctctgaagagctggacacattgagaggattacagtcaaaaggccgc
ggttttctggatgaaatgtgtcagcgtgaaattgaaagaacaggaatttccagccttaaa
attgattttaataacgttttcggatattatattgaagtaagaaacacccataaagataaa
gttccggcagactggctcagaaagcaaaccctcgtcaatgcagaacgatatattacggag
gaacttaaagaatatgaaaaccagattttaggggcagaagagaaaatcggggttcttgaa
aatcagctgtacagaaaagtttgcggagataccattatttacatggatcagattcagcag
aactcgaatatcattgcgcagcttgatgtggcggtaggtttatcggagcttgctgtttct
gaaagctataccaagcctgttttaaacgaaagttttgcgattgatctgaaagaagcaaga
cacccgatcattgaaaatgcgcttcctttaggggaaaaatatattccgaatgatatttat
ctggataaagattctcaacagatcattatggttacgggaccgaatatggcgggtaaatcg
gccattctccgtcagacagcaattgtctgcctgatggcgcagatcggaagttttgttccg
gcaaaatatgctgaaatcggaattctggataaaattttcacaagagtcggggcaacagat
aatatttcggcgggagaatcaactttcatggttgaaatgaacgaggctgccaatatcctt
aataatatttcggaacgaagcctgatccttttagatgaaatcgggcgcggaacttccacg
tatgacggggtttccattgcatgggctattgcagagtatcttcatcagcatcctactcaa
gccaagaccttatttgccacacattatcatgaattaaatgaaatgacggtgaattttgaa
agggttaaaaatttccacgtttctattcaggagaataaaggcaatattatatttttaaga
aaactgattccgggcggaagcgagcacagcttcgggattcacgtcgccaaactggccgga
atgcctgcaaaagtagtgaacagagccaatgaaatcctgaaaacactggaggccagccgt
acccaaggcagctcttcggaaagtatcaaaagggtaacggaagaaaatatgcagctttct
tttttccagctggatgatcccgttcttgaaaatatccgtgaggaacttacgaagattgat
atcaacacattaacgccgatagaggctttaatgaagctgaacgccatcaaaaaaatgatt
ggcggataa
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