Chryseobacterium shandongense: EG350_01325
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Entry
EG350_01325 CDS
T05920
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csha
Chryseobacterium shandongense
Pathway
csha03030
DNA replication
csha03430
Mismatch repair
csha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EG350_01325
03430 Mismatch repair
EG350_01325
03440 Homologous recombination
EG350_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csha03032
]
EG350_01325
03400 DNA repair and recombination proteins [BR:
csha03400
]
EG350_01325
Enzymes [BR:
csha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EG350_01325
DNA replication proteins [BR:
csha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EG350_01325
DNA repair and recombination proteins [BR:
csha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EG350_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AZA55924
LinkDB
All DBs
Position
264493..264975
Genome browser
AA seq
160 aa
AA seq
DB search
MECFTAIDFETAQGYRWSICQVGLVRVNNGIVTDEINLLIQPPNNYYWDRFIDIHGITPD
MTKEALTFDKVWHKLEPYIKGQAVVAHNGLSFDFPVLEKTLEYYGMENPKYEKHCTYRLF
RQNLASLCNQYKISLNHHDALSDAKACAELFLIHLQSNSL
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttttacagcaatagactttgaaactgcacaaggttatcgttggagtatttgc
caggttgggcttgttcgtgtcaataatggtattgtcacggatgaaatcaatttattaata
caacctcctaataattattactgggatcgatttatagatattcatggcattactccagat
atgacaaaagaagccctcacatttgacaaagtctggcataaattagaaccttatatcaaa
ggacaagccgttgtagctcacaatggtttgtcctttgattttccagttttagaaaaaaca
ttggaatattatggcatggaaaaccccaaatatgaaaaacattgcacgtatcgtcttttt
agacaaaatttagcgtcattgtgtaatcagtataaaatttcattaaatcatcatgatgct
ttaagtgatgctaaagcctgtgctgaattgtttttgatacatttgcaaagtaatagttta
taa
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