Chryseobacterium shandongense: EG350_04825
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Entry
EG350_04825 CDS
T05920
Name
(GenBank) type IA DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csha03032
]
EG350_04825
Enzymes [BR:
csha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG350_04825
DNA replication proteins [BR:
csha03032
]
Prokaryotic type
DNA Topoisomerases
EG350_04825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
DUF3945
Motif
Other DBs
NCBI-ProteinID:
AZA56540
LinkDB
All DBs
Position
complement(1053681..1055765)
Genome browser
AA seq
694 aa
AA seq
DB search
MKTIIAEKPSVAREIAGIVGASDKKDGYLTGNGYFVTWAFGHLIGLGMPEDYGISGFDKT
ALPILPNPFMLTVRKVRKDKGYTADTGVLKQLKVIEKLFNQSESLIVATDAGREGELIFR
YIYEYLKCHKPFERLWISSLTEKAIKQGFDNLKSGKEFDGLYQAAQGRSRADWLVGINAT
QALSIAAGNGIYSLGRVQTPTLALICKRYLDNKNFSIQKYWQIQLLHHKEQIEFKSISTI
KWQDKQQTDDALKSIQRSGTATVTAVESKTVTEQPPLLFDLTGLQKEANKRLNLSAEKTL
NITQSLYEKKFITYPRTGSKYIPEDVWAEIPNLVRALQNREVCKTALSKIKWGRFNKRIV
NDLRVTDHHGLLITDKIPSVLNAEENAVYDMIAFRLLEAISGACIKEITDVSLQTAHYDF
TAKGCKILEAGWRAIKGSFTEEDTEPIQDLPELKKGDELKIKEAIVSEKKTKPPVLYTEA
GLLSAMETAGKEIENEEERKALQNIGIGTPATRAAIIETLFNRNYIQREKKSLIPTEKGL
QVYELVKDQKIADVAMTAEWELALQKIENNEADTETFHKEMEIYAKSITYELLQTSIATN
NLPKLICPKCKQQQLIIRDKIVKCPDEVCNWVQFRNVCGVQIDIVDIENLINKGKTSLIK
GMKSKAGKKFDALIVLNADCNTSFEFEKNKPKRK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaattattgcagaaaaaccaagtgtagcaagagaaattgccggaattgtagga
gcatccgataaaaaagatggttatcttacaggtaacggctattttgttacctgggcattc
ggacaccttataggtttgggaatgcccgaagattatgggatttcgggatttgacaaaacc
gccttgccaatccttccaaatccgtttatgcttaccgttcggaaagtaagaaaagacaaa
ggttataccgcagatacaggtgttttaaaacagttgaaagttattgagaaactgtttaat
caaagtgaaagtcttatcgtggctaccgatgcaggtcgtgagggtgaactcatctttcgc
tacatctatgaatatctgaaatgtcacaaaccttttgaacgcctttggataagttcattg
accgaaaaagccatcaaacaaggttttgacaacctgaaaagcggaaaggaatttgacgga
ttgtatcaggcagcccaaggcagaagccgtgccgattggctcgtaggcatcaatgctaca
caggcattgagtattgcggcaggtaacggaatatattcattgggacgtgtacaaacgcca
acactcgctttaatttgtaaacgttatttggataacaaaaatttctctatacagaaatat
tggcagattcagttattacatcacaaagagcaaattgaatttaaaagcatttccacaatc
aaatggcaggataaacagcaaacagacgatgcgttaaaatctattcagcgaagtggaaca
gcaaccgttaccgctgtagaaagcaaaactgttaccgagcaaccgcctttgttgtttgac
cttacaggcttgcaaaaagaagcgaataaaagactgaacctctctgccgagaaaacgctg
aatattacccaaagcctgtacgaaaagaaattcattacttatccacgtaccggaagcaaa
tacatcccagaagatgtgtgggctgaaattccgaacctcgtaagggctttacaaaacaga
gaagtttgcaaaacagccctatcaaaaattaaatggggacgtttcaataaacgtatcgta
aacgatttgcgagttaccgatcatcacggattattgattacggacaaaataccgtctgtt
ttgaatgctgaagaaaatgccgtgtacgatatgattgcctttcgcttactcgaagccatt
tcgggagcttgcatcaaagagattaccgatgtttcattacagaccgctcattatgatttc
acggcaaaaggctgtaaaattttagaagcaggttggcgcgctattaagggtagttttaca
gaagaagacaccgaaccgatacaggatttgcccgaattgaaaaagggcgatgaactgaaa
attaaagaagcgattgtgtcggaaaagaaaaccaaaccacctgtgctttataccgaagca
ggacttttatcggctatggaaaccgcaggaaaggaaatcgaaaacgaggaagaacggaaa
gctttgcaaaatatcggtatcggtactcccgcaacaagagctgccattattgaaacgcta
tttaaccgtaattatattcaaagggaaaagaaatccctaattcctaccgaaaaaggcttg
caggtgtatgaattggtcaaagaccaaaaaattgccgatgtagccatgactgccgaatgg
gaattggcgttgcagaaaatcgaaaacaacgaagctgatactgaaacatttcataaggaa
atggaaatttatgcgaaatctattacctatgaattgttgcaaacctccatcgctacaaac
aatttaccgaagttgatttgtccaaagtgcaaacaacaacaattgattatccgtgataaa
attgtgaaatgtcccgatgaggtttgtaattgggttcagttccgaaatgtttgtggtgta
caaatcgacattgttgatattgaaaaccttatcaacaagggaaaaaccagtcttatcaaa
ggaatgaaaagtaaagctgggaaaaagtttgatgctttgatcgtattgaatgcagattgc
aacacttcatttgaatttgaaaagaataaacctaaacggaaataa
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