Chryseobacterium shandongense: EG350_05470
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Entry
EG350_05470 CDS
T05920
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csha03019
]
EG350_05470
03009 Ribosome biogenesis [BR:
csha03009
]
EG350_05470
Messenger RNA biogenesis [BR:
csha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EG350_05470
Ribosome biogenesis [BR:
csha03009
]
Prokaryotic type
rRNA processing factors
EG350_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
AZA56657
LinkDB
All DBs
Position
complement(1189030..1190589)
Genome browser
AA seq
519 aa
AA seq
DB search
MKKELIVSHEDDLTKIALLEDGRLCELHEQEDKSDFIVGDLFIGKVKKLAPNLNAAFVNI
GYEKDAFLHYQDLGPQYLTYRKFLKDTITKKQSSSGLKNFEIQPEIDKNGTVDKVIAKDD
VVLLQITKEPISTKGPRISTQISLTGRFLVLIPFDNKVSISKKVKSQEEKERLRTLIESI
KPEGFGVIIRTVAEGKKVADLHNDMNQLIQKWETTFKNIQKNKVPSRVLSEDDKASAILR
DNFNQDFVSITCDDEQMVGEMKNYLEVIAPERKNIVHFYDSHIPLLEYYNVEKQLKQSFG
KHVNIPSSKGAYLVIEHTEALHVVDVNSGNNITTGAAVNKEHALNVNKMAATEIARQLRL
RDMGGIIVIDFIDMTNPEHRRDLYEHLKEEMKRDKARHKILPPSKFGLIQITRQRNRPEK
QIDTKEENPNKDGEIVAPIVIVERMGETLRTIMQKEKGKLYLHVHPFVEAYLTKGFNSIQ
MKWFMKYKKWVIVVPRDSFKYLEYRIYNSKKEELIGYSN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaactaatcgtttcgcatgaagatgatcttacaaagattgcactgctggaa
gacggaagactatgtgaacttcatgagcaagaggacaaaagtgactttatagttggagat
ttgtttatcgggaaagtaaaaaagctggctcccaacctgaatgcagcctttgtaaatatc
ggttacgagaaggatgccttccttcactatcaggatctgggtccgcaatatcttacctat
agaaaatttctaaaggataccatcaccaaaaaacaaagttcttcgggcttaaaaaatttc
gagatacaacctgaaatcgataaaaacggaaccgtagacaaagtaattgccaaagatgac
gttgttttgcttcagattaccaaagagcccatttctacaaaaggccccagaatatcaacc
cagatatcgcttacaggccgctttctggtacttattccattcgacaacaaagtatcgatt
tcaaaaaaagtaaaaagccaggaagaaaaagaaaggttaagaacccttattgaaagtatt
aaacctgaaggttttggcgttatcatcagaaccgttgctgaaggaaaaaaagttgctgat
cttcataatgatatgaatcagctgattcagaaatgggaaactacctttaaaaatatccaa
aaaaacaaagttccgtcaagagttttgagcgaagatgataaagcttcagcgattttgagg
gataatttcaaccaggatttcgtaagcatcacttgtgatgacgaacaaatggttggagaa
atgaaaaactatctcgaagtaattgctcctgaaagaaaaaatattgtccatttctacgat
tctcatatcccactgctggaatattacaatgtagaaaaacagctcaagcaaagtttcgga
aaacacgtaaacattccaagctcaaaaggcgcttatcttgtcatagaacacacagaagcc
cttcacgtggtagatgtaaactccggaaataatattactaccggagcagctgttaacaaa
gaacatgcgttaaatgttaacaaaatggctgctactgaaatagcacgtcagctccgtctt
cgtgatatgggaggaatcattgtaatcgattttatcgacatgacaaatccggagcacaga
agagatctttacgaacatctcaaggaggaaatgaaacgtgataaagcacggcataaaata
cttccaccaagtaaattcggacttatccagattaccagacaaagaaaccgtccggaaaaa
caaattgataccaaagaagaaaaccctaataaagacggagaaatcgttgctccgatcgtt
attgtggaaagaatgggagaaaccctcagaaccatcatgcaaaaggaaaaaggaaaactt
taccttcatgtacacccttttgtggaagcttaccttacaaaaggattcaacagtatccag
atgaaatggtttatgaaatacaaaaaatgggttatcgttgttccaagagattcttttaaa
tatttagaatacagaatttacaattcaaaaaaagaagaattgataggatattctaattaa
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