Chryseobacterium shandongense: EG350_05475
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Entry
EG350_05475 CDS
T05920
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csha03032
]
EG350_05475
03036 Chromosome and associated proteins [BR:
csha03036
]
EG350_05475
03400 DNA repair and recombination proteins [BR:
csha03400
]
EG350_05475
DNA replication proteins [BR:
csha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EG350_05475
Chromosome and associated proteins [BR:
csha03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EG350_05475
DNA repair and recombination proteins [BR:
csha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EG350_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF4777
COMMD9_HN
DUF937
Motif
Other DBs
NCBI-ProteinID:
AZA56658
LinkDB
All DBs
Position
complement(1190956..1191246)
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AA seq
96 aa
AA seq
DB search
MTKAELVNTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFVEKVKTKVTVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtaaacaccatctcaaataagttgggaaccgaaaagaatgaa
acacagaaagttgtagaagcttttatgcaagaaatcagaacttctatgtataatggagat
aatgtttatttgagaggttttggatcttttatcattaaaacaagagcagctaaaacggga
agaaacatctctaaaaatactgcaattgaaatccctgctcataacattcctgctttcaag
ccatcaaaatcttttgtggagaaagtaaaaacgaaagttaccgtaaaataa
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