Chryseobacterium shandongense: EG350_06225
Help
Entry
EG350_06225 CDS
T05920
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
csha
Chryseobacterium shandongense
Pathway
csha00300
Lysine biosynthesis
csha00470
D-Amino acid metabolism
csha01100
Metabolic pathways
csha01110
Biosynthesis of secondary metabolites
csha01120
Microbial metabolism in diverse environments
csha01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EG350_06225
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EG350_06225
Enzymes [BR:
csha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EG350_06225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AZA56789
LinkDB
All DBs
Position
1352576..1353934
Genome browser
AA seq
452 aa
AA seq
DB search
MEKKIYERPIIKPLNTGLMNKFGTRTEYLAMTHIDGVAVKDLIKNYGSPVFVYSEAKIRS
NYQNAKRAFTTRYPKIQFAWSYKTCYLNAICNIYHQEGSWAEVVSRFEYDKALKNGVPGN
KIIFNGPDKTAEDLTLAIDNDSLIHIDHFDELYMLTEIAQQKNVKPRVAIRVNMDCGVYP
LWDRFGFNYETGQAWDAISKILVTGNLNLVGLHTHIGTYIMSSAAYAVAASKMADLALGI
RNKFNKIIEYIDMGGGFASKNTLKGSYLQATDYVPEISEYGDAICSTLLTSGFQANELPY
LYLETGRALIDDAGYLCGSVIANKRLSDGRKATIMDFGVNLMFTSFWYDHKITPAQEFGH
HTEENVLYGPLCMNIDVVRSSIMLPPLKTKDNVVVHHVGAYCVTQSMQFIALRPKVVLID
MDDKVHIIKSNESLEDLEKNEISPEYLGKNSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaaatatacgaaagaccaatcataaaacctttaaatacaggattaatgaac
aagttcggaacaaggaccgagtatcttgccatgacgcatatagacggtgttgctgtgaaa
gacctcattaaaaactatggttctcccgtatttgtatattctgaagcgaaaataagaagc
aattatcagaatgcgaaaagagcatttactacaagatacccaaagatacagtttgcatgg
agctataaaacatgctatctcaatgccatctgtaatatctaccatcaggaaggaagctgg
gcggaagtagtaagccggtttgaatatgataaagcccttaaaaatggagttccaggcaac
aaaattatttttaacggacccgataaaacggctgaagacctcactctggcaatagataat
gacagcttaatccacatagatcacttcgatgagctgtatatgcttacagaaattgcccag
caaaaaaatgtaaaaccgagagttgccatccgtgttaatatggattgtggtgtatatcct
ctctgggatcgcttcgggttcaactacgaaacaggtcaggcttgggatgccatttccaaa
atactcgtaacaggaaacctgaatcttgttggcttgcatacccacataggaacatatatt
atgagcagtgctgcgtatgctgttgctgcaagcaaaatggctgatctggcattgggcatc
aggaacaagtttaataaaataatagaatacatagacatgggaggcggctttgcttcaaaa
aataccctcaaaggcagctaccttcaggctacggattatgttccggaaataagtgaatat
ggcgatgcaatatgttctacactgcttacatctggttttcaggccaacgaattgccgtat
ttatatttagaaacaggacgcgctctaatagatgacgccggatatctgtgcggaagtgta
atagcaaataaaagactaagtgacggacgaaaagctactattatggattttggagttaat
cttatgtttacctctttctggtacgatcataaaataactccggcacaggagtttggacat
cacacagaggaaaatgtgctttatgggccgctttgtatgaatatagacgttgtaaggagc
agtattatgctgcctcctctaaaaaccaaagataatgtcgtagtgcatcatgtaggcgca
tactgtgtgacacaaagcatgcagtttatagcgcttcgcccgaaagtcgttttaattgat
atggatgataaagtgcatatcatcaaaagcaatgagagtcttgaagatcttgaaaagaat
gagatctctcccgaatatttgggtaagaattcattataa
DBGET
integrated database retrieval system