Chryseobacterium shandongense: EG350_06675
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Entry
EG350_06675 CDS
T05920
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csha03032
]
EG350_06675
03400 DNA repair and recombination proteins [BR:
csha03400
]
EG350_06675
Enzymes [BR:
csha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG350_06675
DNA replication proteins [BR:
csha03032
]
Prokaryotic type
DNA Topoisomerases
EG350_06675
DNA repair and recombination proteins [BR:
csha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG350_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AZA56876
UniProt:
A0A3G6MUD6
LinkDB
All DBs
Position
complement(1456486..1457589)
Genome browser
AA seq
367 aa
AA seq
DB search
MENSELEIISHLKPSKIVKIMKDPVASAKAVHLIYTSDAETAGITRKKTGKKYSYYKDGE
KIRDKDEISRINKLVIPPAWENVWICALDNGHLQATGFDLKKRKQYRYHPLWSALRNHTK
FYRMLQFGYALPDIRLHVEKDLALKNFEKRKILALIVSLMQRTNIRIGNNAYEKLYGSFG
LTTLKGKHVKIQGQKISFHFKGKKGVMHDIDLKSKRLSKLIQKCKDIPGKELFQYIDDEG
NRHTVDSGMVNDYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAETHTEYKKKVKEAL
EIVASHLGNTSTVCRKYYVHPLVINLYENNTIKKYLDELEKIEENDGKADLTHEEKLVLK
ILENEKL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcagaattagaaatcatttcccatctgaagccttcaaagattgtcaaaatt
atgaaagatccggtagcatctgcaaaggcggtacatcttatatatacctccgatgcagag
acagccggtatcacacgcaaaaagactggaaaaaaatattcctattacaaagacggcgag
aagatcagggacaaagacgaaatttcacgaatcaacaagctggtaatccctccagcatgg
gaaaacgtatggatttgcgcgcttgataacggtcatctccaggcaacaggatttgatctg
aagaaaagaaagcaataccgataccatcccttgtggagtgcccttcgcaatcatacaaaa
ttctacagaatgctacaattcgggtatgctttgccagatatccgtctgcatgttgagaaa
gatttagccctaaaaaatttcgaaaaaagaaaaattcttgccctgattgtaagtcttatg
caacgaactaatatcaggatcggcaataatgcttatgaaaaactgtatggttctttcggc
ctcactactttaaaaggaaagcatgtaaaaattcagggacagaagatttcgtttcacttt
aaaggtaaaaaaggggtgatgcacgacatcgatctgaaaagtaaaagattatcaaagctg
atccaaaaatgtaaagatattcctggtaaagaacttttccaatacattgatgatgaaggt
aaccggcatactgtagattccggaatggtgaatgattatattaaagaaatcagcggtgaa
gattttacggcaaaagatttcagaacgtggtccggaactgtaagcgcattgatcgcattt
aaggaaataggatatgcagaaacccatacagaatataagaaaaaagtaaaagaagccctt
gaaatagtagcttcacacctcggaaacaccagcactgtatgcagaaaatattatgttcat
ccacttgtcatcaacctgtatgaaaataatactatcaaaaaatatcttgatgaactcgaa
aaaatagaggaaaacgatggcaaagcagatcttacgcacgaggaaaaactggtgctgaag
attttagaaaatgagaaattgtga
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