Chryseobacterium shandongense: EG350_07560
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Entry
EG350_07560 CDS
T05920
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_07560
Transporters [BR:
csha02000
]
Other transporters
Pores ion channels [TC:
1
]
EG350_07560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl_2
Motif
Other DBs
NCBI-ProteinID:
AZA57042
UniProt:
A0A3G6QDI7
LinkDB
All DBs
Position
1639787..1641250
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AA seq
487 aa
AA seq
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MKSKLSILSLAIALPTCLFAQDSLQVMNNTQYPNTFSSGSADVQPFTNSSKRFNDWSISF
GAGVPLIQTGDLLSIKANDRSGKDLFGYSAYVSVDKAITHAFGLKLQYDRGETRQGYFNT
KDAAPANAAANMQVGARTQYDAISILGDINFSNLLRRVDNKSPFRWALHGYAGIGSLAYR
AYQKDETGQRLMTEIKPFKLASLFGQAGAGLKYKISNRLDLEGRVMYVVTTDDAFDGGGS
QNSMINRRNNKTSDNFINTTLGLTVNLGKHESHLMWHDPLQEAYYKISVLESKVTDLVVC
KNGDADNDGVCDDWDRQLDTPAGARVDGSGVALDVDLDGVIDLYDKCVTVPGSVENNGCP
DQTQGQGAVAETETKLEGIEFDLNSDRILPSNTPILNNAVSYINSSDGSYTVVGATDTRG
TEAYNQMLSERRANNVKNYLMQNGVQSGKLDAQGNGKTDLKYPECDPASKCPEWKNRANR
RVYFKAK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaactatcaatcttatcgttggcaatagcattacccacatgcctttttgct
caggattcattacaggttatgaacaatacgcagtatccgaatactttttcttcaggatct
gctgatgtgcagccatttacaaactcttcaaagagattcaatgactggtcaatctcattt
ggggcaggggttccacttattcaaacaggtgatcttttgtcaatcaaggctaatgacaga
tctggaaaagatctttttggatactcagcatatgtaagtgttgataaggcaattacccat
gcattcggattgaaattgcaatatgatcgtggtgaaacaagacaaggatatttcaacaca
aaagatgccgcaccggcaaatgctgcagccaatatgcaggtaggagcaagaacccagtat
gatgcgatctcaattttaggagacatcaacttctctaatcttttaagaagggttgataac
aaatcaccgttcagatgggcgcttcatggttatgcaggtatcggttcattggcgtacaga
gcttatcagaaggatgagacaggacaaagattaatgactgaaatcaagccattcaaatta
gcttcgttattcggacaggcaggtgcgggtttaaaatataaaatcagcaaccgtttagac
ctggaaggaagagtaatgtatgttgtaactacggatgatgcctttgatggtggaggttcg
cagaacagcatgatcaacagaagaaataacaaaacttccgataattttatcaacacaact
ttaggtcttactgttaatttagggaagcatgaatctcacctgatgtggcatgatccttta
caggaagcatattacaaaatcagcgtgttggaatctaaggttacagatttagttgtttgt
aaaaacggagatgcagataatgacggagtttgcgatgattgggacagacagcttgacact
cctgcaggagcaagagtggacgggtctggtgttgctttagatgtggatctagatggagta
atcgatctttacgataagtgtgtaacagttccgggaagtgtagaaaacaacggatgtcct
gaccaaactcagggacagggagctgttgctgaaacagaaacaaaacttgaaggaattgaa
tttgaccttaactcagacagaatcttaccttcaaatacgcctatcttaaataatgcagta
agctacattaattcatccgacggttcatacactgtagttggtgctaccgatactagagga
actgaagcttacaatcaaatgttatcagagagaagagcaaataacgtaaaaaattatttg
atgcagaacggtgtgcagtcaggaaaacttgatgctcagggaaatggtaaaacagacctt
aaatatcctgaatgcgatcctgcttcaaaatgtccggaatggaaaaacagagctaataga
agagtatattttaaagcaaaataa
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