Chryseobacterium shandongense: EG350_08285
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Entry
EG350_08285 CDS
T05920
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_08285
Transporters [BR:
csha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EG350_08285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
DUF2961
Chlam_vir
Motif
Other DBs
NCBI-ProteinID:
AZA57178
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All DBs
Position
1808249..1809667
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AA seq
472 aa
AA seq
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MRKILISAVLFSLVFSCKDDYLDTERVGATDASSFFKTEADAMQATNAIYVALRSWENSA
FPAQYVFGVPADDVEKGSNPGDASFINAYDQFTYTASDSGVEGYWIGQWQFVNRCNQVIT
NVPTIDMDATLKNRLVAEAKMLRAYFYFNLVRIYGGVPIFDGVQTNYNIPRNSVDEVYNF
IISDLTSAAAVLPQSYPASDLGRMTKGGALGLLSKVYLYKKDWQKAYDASNQVIAMGYNL
DPNFNHLFRPAGEFGSESVIEVNCQCSTEFGGSQYAEVQGVRNQFGWGFFTPTAALESAF
ETGDIRKELTILRNGETTPEGDLIQKGDPQAGNVWNQKVYVPKSLNNNACGYGSIQNIRI
LRFAEVLLINAEAANELGNTTAAITNLNKVRTRAQLAGTTATTQSALRAAIWRERRVELA
MEGDRFVDLVRTGQAATVLASYGFKAGKNEVFPIPLNSINQSSGILTQNPGY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatacttatatcagccgttttattttcgttagtctttagctgtaaagacgat
tatttagatacggaaagagtaggggctacagatgcttcttcgtttttcaaaactgaggca
gatgctatgcaggctaccaatgcaatttatgttgcattaagaagctgggaaaattctgca
tttcctgctcagtatgtttttggagttcctgcagatgatgtagaaaaaggatcaaatcct
ggagatgcttctttcataaatgcttatgatcaatttacttatactgcaagtgattcaggt
gtagaagggtattggattggccaatggcaattcgtaaacagatgtaatcaggtaattaca
aatgtaccaactattgatatggatgctactcttaaaaatcgtttagtagctgaagccaag
atgcttagggcgtatttttacttcaatctggtaagaatttacggaggagttccaattttt
gatggagtacagactaattataatattccaagaaactctgtagatgaagtatataatttc
attatttctgatcttacaagtgcggctgctgttttacctcaatcatatcctgcttcagat
ttaggaagaatgacaaaaggcggagcgttaggacttttatcaaaagtgtatttatacaaa
aaagactggcagaaagcgtatgatgcttctaatcaggtaattgcaatgggttataatctt
gaccctaattttaatcacttattccgtcctgcgggagagtttggatcagaatcggttatt
gaagtaaactgtcaatgttccacagaattcggaggaagtcagtatgcagaagttcaagga
gttagaaatcagtttggatggggctttttcacgccgacagcggctttagaatcagctttt
gaaacaggagatatccgtaaagaattaacaattttgagaaatggtgaaactactcctgaa
ggagatttaattcaaaaaggagatcctcaggctggaaatgtgtggaatcaaaaagtatat
gttccaaaatctctaaataataatgcttgtggatatggatctatacaaaatatcagaatc
ttaagatttgctgaagttcttttaatcaatgctgaagcagctaatgaattaggaaacaca
accgctgcgattaccaatcttaataaagtaagaacaagagcacaattggcaggaactacc
gctacaacacaatctgcattaagagccgctatctggcgtgagcgtagagtggaacttgca
atggaaggagaccgttttgtagatctagtgagaacaggacaggcagcaactgttttggca
tcatatggatttaaagccgggaaaaatgaagtattcccaattcctttaaactcaataaat
caaagtagtggtatcttaacccagaaccccggctactaa
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