Chryseobacterium shandongense: EG350_08780
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Entry
EG350_08780 CDS
T05920
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csha03400
]
EG350_08780
Enzymes [BR:
csha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
EG350_08780
DNA repair and recombination proteins [BR:
csha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
EG350_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AZA57268
LinkDB
All DBs
Position
complement(1936225..1937703)
Genome browser
AA seq
492 aa
AA seq
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MANKITHTAQIIFPHQLFKDIDYLDKSQPVFLVEEFLFFKQYLFHKQKIAFHRATMKFYE
NELKESGFEVEYIESSSKFSDIRNLITNLEKENFKTIKTTDVCDNWLEKRLRKTKLEIEI
LDSPLFINTKADLKDYFEDKKAYHQTDFYKQQRITRNILMKAGKPLGGKWTYDTENRKKY
PKNKQTPAIHFPENNHYYEEAKKYTEKHFAENYGTLNNEQLYPVTFKEAEKWLEQFLELR
FHEFGVYEDSIVEKEHFLHHSVLSPLMNVGLLTPEDVLEKAISFAKDNDIPVNSLEGFVR
QILGWREFVRGVYLYQGTYQRNKNYWNNNKKLPDSFYTAKTGIRPIDSSLQKILKTGYAH
HIERLMIFANFMNLCQINPDEMYQWFMEMFIDSYDWVMVPNVYGMSSFSDGGKMSTKPYI
SGSNYLKKMSDYPDGDWTEKWDALFWYFINDYQDFFAKNPRLGMMLRTWERMPEDKRKQH
LKTAKEFIANLK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaaataacgcataccgcccagattatttttccgcatcagctttttaaggat
atagactatctcgataagagtcagcctgtatttttggtggaagaatttttgttttttaag
caatatttatttcataaacaaaagattgcgtttcatcgtgcaaccatgaaattttatgaa
aatgaactgaaagaatctggttttgaggttgaatatatagaaagttcatcaaaattttca
gacatcaggaatttaattacaaatcttgaaaaagaaaatttcaaaacaataaagacaact
gacgtctgcgacaactggctggagaaaagactgcgaaaaacaaagctggaaattgaaatt
ctggacagtccgctttttatcaacaccaaagcagatctgaaagattattttgaagataaa
aaagcctatcatcaaaccgatttttacaagcagcagcgcatcacccgaaatatcctgatg
aaagccggaaaaccattgggaggaaagtggacctacgacacggaaaaccggaaaaaatat
ccgaaaaataaacagacgcctgccattcattttccggaaaacaatcattattatgaggaa
gccaagaagtacacggaaaaacattttgccgaaaactatggaacactcaacaatgaacaa
ctctaccctgttactttcaaagaagccgaaaaatggctggaacagtttctggaactgcgt
tttcatgagtttggcgtttacgaagacagcattgttgaaaaggaacattttctgcatcat
agcgtgctttcaccgttgatgaatgttggattgttaactcccgaagatgtccttgagaaa
gcaatttcgtttgctaaagacaatgatatccctgtaaattctttggaaggttttgtgcgt
cagattttgggttggcgagagtttgttcggggtgtttatctttatcagggaacatatcag
cgcaataaaaattactggaataacaacaaaaaacttccggactctttttataccgcaaaa
acgggaatccgcccgattgacagttcgctgcagaaaatcctgaaaaccggttatgcccat
cacattgaaagactgatgatttttgccaattttatgaatctatgtcaaatcaatcctgat
gaaatgtaccaatggtttatggaaatgttcatcgattcctacgattgggtaatggttccg
aatgtgtacggcatgagcagcttttcagacggcggaaagatgagcactaaaccttacatc
agcggaagcaattatctgaaaaaaatgagtgactatcctgatggagattggacggaaaaa
tgggatgcgctgttttggtattttattaatgattatcaagattttttcgcaaaaaatccg
cgtttgggaatgatgctgagaacatgggagagaatgcctgaagataagcgaaaacagcat
ttaaaaacagcaaaagagtttattgcaaatttgaaatga
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