Chryseobacterium shandongense: EG350_08875
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Entry
EG350_08875 CDS
T05920
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
EG350_08875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH
HHH_5
HHH_6
HHH_2
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AZA57287
LinkDB
All DBs
Position
complement(1960642..1962765)
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AA seq
707 aa
AA seq
DB search
MNTTLYIQQILDIPEKNIIPTLQLLAEDCTIPFIARYRKDKTGNLDETQIEQISKISRQF
EEIAKRKETILKSVEEQNALTSELKQRIEESFNLQELEDLYLPFKKRKKTKADAAKEKGL
EPLAKIIMSQKAQDLQSLASRYLSDKVETGEEALQGARDIMAEWINENMYVRKNLRRIFQ
RKAVITSKVVKGKQEEEDAKKFSQYFEWEENLSRTPSHRLLAMLRAESEGYVKTNVTIDK
AEAIEFIENAIIKSDNETAEQIALAIKDSYKRLLEPAISNEVLQEAKEKADKKAIDIFSE
NLTQLLLAPPLGEKRILAIDPGYKSGCKVVCLDEKGDLLHNETIYPHAPQNESGMAMKKI
RSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPLQVFVVSEAGASVYSASKIAREEFP
SYDVTVRGAVSIGRRLADPLAELVKIDPKSIGVGQYQHDVDQTQLKNELDSTVMKCVNSV
GINLNTASKSLLSYVSGIGEKMAENIVNYRAENGAFEDRKQLKKVPRLGEKAFQQAAAFV
RISNPKNPLDNSAVHPEAYGIVEKMAKDLGVKTHELIAHKEKIAQIKPEKYITDDIGILS
IKDIVKELEKPGLDPRKAAKIFEFDPSVKKITDLKIGMILPGIVNNITAFGCFVDLGIKE
SGLVHISQLKDGFVSDVNEVVKLHQHVQVKVTDIDEGRKRIQLSMIL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccctttatatacagcagattcttgatattcctgaaaaaaatattatccct
acccttcagctgttggccgaagactgtaccattccttttattgcccgttatcggaaagat
aaaacaggaaacctggacgaaacacagattgagcagatttcaaaaatcagcaggcagttt
gaagagattgccaaaagaaaagaaaccattctaaaatccgtagaagagcaaaatgccctc
acttccgaattaaaacaaagaattgaagaaagcttcaacctgcaggagcttgaggattta
taccttccttttaagaaaagaaaaaaaacaaaagctgatgctgcaaaagaaaaaggcctt
gaacctttagctaaaataatcatgagccagaaagcccaggatctgcagtctttggcttca
agatacctcagtgacaaagtagaaacgggagaagaagcacttcagggagcgagagatatt
atggccgaatggattaatgaaaacatgtatgtccgcaaaaacctaaggaggatcttccag
agaaaagccgtaattacttcaaaagttgtgaaaggaaaacaggaggaagaagatgctaaa
aaattttcacaatatttcgagtgggaagaaaacctcagcagaaccccctcccatcgcctc
ctcgcaatgttgcgtgcagaatcggaaggctatgtgaaaacaaatgtcacaattgataaa
gctgaagcgattgagttcatagaaaatgccattattaaatctgataacgaaacggcggaa
cagattgcattggccataaaagacagctacaaaagattgctggaacctgcgatttctaat
gaagttttacaggaagctaaagaaaaagcagataaaaaagcaatcgatattttttccgaa
aaccttacgcaacttctccttgccccaccattgggagaaaaaagaattcttgctatcgac
ccgggatacaaaagcggatgcaaagtagtttgccttgacgaaaaaggagatctattgcat
aatgaaaccatttatcctcatgcgcctcaaaacgaatccgggatggcgatgaagaaaata
cgttctatggtaaacgcgtataacatcgaagccatttccatcggaaacggaacagccagc
cgcgaaacggaatttttcatcaaaaaaattgctttcgacaaaccgctccaggtttttgtg
gtttctgaggccggagcatccgtatattccgcaagtaaaattgcaagggaagaatttccg
tcgtacgatgtaaccgttcgtggtgcggtatccattggaagaaggttagcagatcctctg
gcagaactggtgaaaatcgatcctaagtccatcggcgtaggacaatatcagcatgatgta
gaccagacccaattgaaaaatgagctggattctaccgtaatgaagtgcgtaaactcggtg
ggaattaatcttaatacagccagcaaatcgctgctaagttatgtttccggaatcggcgaa
aaaatggcagaaaatatcgtcaattaccgtgcagaaaacggagctttcgaagacagaaaa
cagcttaaaaaagttcccaggttgggtgaaaaagcttttcagcaggctgcagcattcgta
agaatcagcaatccgaagaatcctttggataattctgccgtacatcctgaagcctacgga
attgttgaaaaaatggcaaaagatttaggtgtcaaaacgcatgaactgattgcccataaa
gaaaaaattgctcagattaaacccgaaaaatatatcacagacgatatcgggattttaagc
attaaagatattgtaaaagagcttgaaaaacccggactggacccaagaaaagcagctaaa
atttttgaattcgatccgagtgtaaagaaaattaccgacctgaaaatagggatgattctt
cccggaattgtcaataatattaccgctttcggatgctttgtagatttaggaattaaagaa
agcggactggtgcatatttctcagttgaaagacggatttgtctctgatgtgaatgaagtg
gtaaaactgcatcagcatgttcaggtaaaagtaacggatatagatgaaggcaggaaaaga
atacagctgagcatgattttataa
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