Chryseobacterium shandongense: EG350_10590
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Entry
EG350_10590 CDS
T05920
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
csha
Chryseobacterium shandongense
Pathway
csha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EG350_10590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csha03021
]
EG350_10590
Transcription machinery [BR:
csha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EG350_10590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AZA57601
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All DBs
Position
2335513..2336379
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVELAQRIRAGDRAALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALNTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaatcactaagcaggtaaccaatagggaaactgcttcattagacaag
tatttgcaggaaattggtaaagttgaattgattactgcggacgaagaagtagaattagca
caaaggatccgtgccggcgatagagccgcgctggaaaaattaatcaaagctaaccttcgt
ttcgtggtatcggtatcgaaacaataccaaaaccagggtctttctttaccggatttgatt
aatgaaggtaacctgggactcatgaaagcggcaaaaaggtacgatgagactagaggtttc
aaatttatctcttacgcagtttggtggatccgtcagtcgattttacaggctttggcagaa
cagtcgagaattgtaagattgccattgaacaagatcgggtctatcaataagatcaataaa
gcttacgctcaccttgaacaggaaaacgaaagaccgccttcaccggaggaattggcagaa
gttcttgatatgagcgaggaagatatcaaggaatcaatgaaaaattccggaagacatttg
tcaatggatgcgcctttggtagaaggagaagattcaaatctttatgatgtattacgttca
ggagaatcgccaagtccggataaggatctgatgcttgaatcgctacagattgagatcgaa
agagcattgaacacacttactcccagagaggctgatttggtaagattatattttggactg
aacggaaaacatccgatgactctggaagaaatcggtgaaactttcgaccttacgagagaa
agggttcgtcagatcaaagaaaaagcgatcaagagattgaaacacaacaccagaagtaag
atcttaaaatcttatctgggtaaataa
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