Chryseobacterium shandongense: EG350_12370
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Entry
EG350_12370 CDS
T05920
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
csha
Chryseobacterium shandongense
Pathway
csha02024
Quorum sensing
csha03060
Protein export
csha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
EG350_12370 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EG350_12370 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EG350_12370 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csha02044
]
EG350_12370 (secD)
Secretion system [BR:
csha02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
EG350_12370 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
DUF3165
Motif
Other DBs
NCBI-ProteinID:
AZA57929
UniProt:
A0A3G6MYW3
LinkDB
All DBs
Position
complement(2768241..2771153)
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AA seq
970 aa
AA seq
DB search
MQGKGLITIVAIVLGLICLNELLPTWYASKIEKQATAIAGDNPEKYQKEIARLSKDTLNL
GFTKLYYTKAKDKEMKLGLDLKGGINVLLEINQRDLVNDLTNYSTNPILIEALNKTDEVQ
KNSTRSYIDNFFEQFDAINKAKGTNLKLADPELFGNTTLTEVKYNTPDEQVKSIVKRKID
ASVGTAFEVIRTRIDKLGAIQPNVQRVPGTARISVEMPGMKDIDKVKKMLQTSAKLQFWE
VQQSPEVYPYFQTLSTMIAAKGDSMGVAKNVNLINILQKGKSMNQSAVGSVKLSDTAVVN
KILNSKVAQSLRPANIKYTQFMWGYKPDASDAESLVLYAVRGNVNQKAPVDGAVETASIG
YDELSRVVVDMQMDSKGAKEWKTLTEKNVGKPVAVTLDNRVYTAPNVVNGIPNGRTQISG
NFSQEEAKELVDVLGAGKLPAGAKVVQATVVGPSLGQESIDAGLMSFMIAFAIIIVYIIF
YYGGAGVYAVIAMIINLFYIFGIMDSGDFTLTLPGIAGIVLTMAVAVDTNVIIYERTKEE
LFAGKSILEAYKDGFKHALNAIIDGHTTTFLTAVVLFFFGTGPIKGFALTLMIGVAMTLF
TSVLLSRVMIFSRLNKGKGLSVWTPATKNLFRNTWIDFIGKRKYAYIFSAVLTVACIISI
ATHGFKYGIDFTGGRNYVVRFDKDVKAEDIEEKLVTLFKTEDGKNSSVEAKTFGSNNQLK
ISTDYLIEDESLKADQIIEQKLFQGLKSELPAGTTLKDFKSADKEHAGIISSEKVGPSVA
DDIKIHGLYAVLGALGIIFIYILVRFRKWQFSLGAVAALFHDAVIILGAYSLLHKYMPFN
MEINQDFIAAILTVLGYSINDTVIIFDRIREYLREKKSLTLAGLFDDSISSTLGRTFNTS
FTTILVILAIFIFGGDNLRGFMFAMLIGIGFGTYSSIFVASAIAYDFLKKGKEEEVHGKS
TTNKEVLASK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaaaaggacttattacaattgttgctattgtactagggttgatttgcttaaac
gagctattaccaacatggtacgccagcaaaattgaaaagcaggcgactgctattgcagga
gacaatccggagaagtatcagaaagaaatcgccagactttctaaggatacactgaatctg
ggattcacaaaactttattacaccaaagccaaagacaaggaaatgaaacttggtcttgac
cttaaaggagggatcaatgttcttttggaaatcaaccagagagatcttgtgaatgattta
accaattattctacaaaccctatcctgattgaggctttgaacaaaacagatgaagttcag
aagaattccacaagatcgtacatcgacaatttctttgagcagttcgatgcgattaacaaa
gctaaaggtacaaacctgaagttagcagatccggaacttttcggaaacacaacacttact
gaagtaaagtacaacacacctgatgagcaggtgaaaagcattgttaaaagaaagattgat
gcatctgtaggtacggctttcgaggtaatcagaaccagaatcgataagttgggtgctatc
cagccgaacgttcagagagttccgggtacagccagaatttctgtggaaatgcctgggatg
aaagacatagataaagtaaaaaagatgcttcagacttcagcaaagcttcagttctgggaa
gtacagcaatctcctgaagtttatccttatttccaaacattatctacaatgattgctgca
aaaggtgattctatgggtgttgcaaaaaatgtaaatctcattaatattttgcagaaagga
aaatcaatgaatcaaagtgctgtaggaagtgtgaaattgtctgatacggctgttgtaaat
aaaattttaaacagtaaagttgcacagtctttacgtcctgcaaatattaaatatacacag
ttcatgtggggctataagcctgacgcttcagatgcggaaagtcttgtactatatgcagta
agaggtaatgttaaccagaaagcgcctgtagacggagctgttgaaacggcaagcatcggt
tatgatgagttgagcagagtagtggtagacatgcaaatggactctaaaggagctaaagaa
tggaaaacattaactgaaaaaaatgtaggtaagccagtagctgtaacacttgacaacaga
gtttatacagcaccaaacgtggttaatggaattccgaacggaagaacacagatttccggt
aacttctctcaggaggaagcaaaagaattggtagatgtattaggagcaggtaagttacct
gccggtgcaaaagtagttcaggctacggttgtaggtccgtctctagggcaggaatcaatt
gatgcaggtctaatgtcatttatgatcgcatttgcaatcattatcgtttatattattttc
tattatggaggggcaggtgtatatgcagtaattgcaatgatcatcaaccttttctatatt
ttcggtatcatggattccggcgattttacgcttacgcttccaggtatcgcgggtatcgtt
ttaacgatggcagttgcggtcgatacaaacgttatcatttatgagagaacaaaagaagaa
ttatttgcaggcaaaagcatccttgaagcttataaagatggttttaaacatgcattgaat
gcgattatcgatggtcataccacaactttcttaacggcagttgtattattcttcttcgga
acaggtcctatcaaaggttttgctctaaccttgatgatcggggtggctatgacattattc
acgtcagtattgctttcaagagtaatgatcttctcaagattaaataagggaaaaggactt
tcagtatggacacccgcaacgaaaaatctattcagaaatacctggatcgatttcatcggt
aaaagaaaatatgcttacattttttcagccgttttaacggtagcttgtattatttccatc
gcaacacacggtttcaaatacggtattgattttaccggtggtagaaactatgtggtaaga
ttcgataaagatgtaaaagcagaagatattgaagaaaaattggtcacgctattcaaaact
gaggatggtaaaaactcgtcagtggaggctaaaactttcggaagcaacaatcagttaaag
atctctaccgattatcttatcgaagacgaatctttgaaagcagatcagatcattgaacag
aagctattccagggattaaaatcagaattgcctgcaggaacaacattaaaagattttaaa
tctgcagataaagaacatgcagggattatttcttccgaaaaagtaggaccttcagttgcg
gatgatatcaagattcatgggttatatgcggttttaggagctttaggaattatctttatc
tacatcttagtgcgattcagaaagtggcaattctcccttggtgcagttgcagcattgttc
catgatgcggttattattttgggagcatattcactgcttcacaagtatatgccgttcaat
atggaaatcaatcaggattttattgccgcaattcttacggtattagggtattcgattaat
gatacggtaatcatcttcgacaggatcagggaatatttaagagaaaagaaatcattaaca
ttagcaggattgtttgatgattctatttccagcacattgggtagaacatttaacacctca
tttactacaatccttgtaattttagccatcttcattttcggtggagataacctgagagga
tttatgtttgcaatgttaatcggtatcggtttcggtacgtattcgtccatcttcgtagcg
tcggcaattgcctacgacttcctgaagaaaggaaaagaagaggaagttcatggtaaatca
actaccaacaaagaagtacttgcttcaaaataa
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