Chryseobacterium shandongense: EG350_13245
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Entry
EG350_13245 CDS
T05920
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csha03016
]
EG350_13245 (truB)
Enzymes [BR:
csha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EG350_13245 (truB)
Transfer RNA biogenesis [BR:
csha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EG350_13245 (truB)
Prokaryotic type
EG350_13245 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZA58092
LinkDB
All DBs
Position
complement(2968269..2968967)
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AA seq
232 aa
AA seq
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MTAEDLQSGHIFLLDKPLDWTSFQAVNKMKYKLKREFDLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKIPEIQDAPKEYWTEIKIGVQTESYDTEKPEILHKDISNITEEHIHKALAKF
IGEIDQTPPVFSAIKIEGKRAYDLARAGEEVEMKSRKTTILYINEIKVNLPLVSFIVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGEYKIEDATSDFLENDFRFNQP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaagacttacagtcaggacacatttttttattggacaagcctttggattgg
acgtcttttcaggcagtcaataaaatgaaatacaagctcaaaagagagtttgatcttccc
aagaaattcaaaatcggtcatgccggaacattggatccaagagcaaccggacttctgatt
gtatgctgtggaaaattcaccaaaaaaattccggaaatccaggatgcgcctaaagagtat
tggacggaaataaaaatcggcgtgcagaccgaatcctatgataccgaaaagccggaaatt
cttcacaaggacatttcaaatattacagaagagcatattcataaagctttggcaaaattc
attggagaaatagatcagactccgccggtgttttccgcaataaaaattgaaggaaaaaga
gcttacgatcttgcgagagcaggagaagaagtagaaatgaaatccaggaaaacaacaatc
ttatacattaatgaaattaaagtaaatcttcctttggtaagtttcatcgtgggctgttca
aaaggaacttatattagaagcctggctcatgatatcggacaggaactgggagttggggcg
taccttactcagctgaggaggacaaaaatcggggaatataagattgaggatgcaacatct
gattttctggaaaacgattttagatttaatcaaccatga
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