Chryseobacterium shandongense: EG350_13580
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Entry
EG350_13580 CDS
T05920
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csha03016
]
EG350_13580
Enzymes [BR:
csha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EG350_13580
Transfer RNA biogenesis [BR:
csha03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EG350_13580
Prokaryotic type
EG350_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Lactamase_B_6
Anti-Pycsar_Apyc1
RTP
Motif
Other DBs
NCBI-ProteinID:
AZA58152
LinkDB
All DBs
Position
complement(3047978..3048892)
Genome browser
AA seq
304 aa
AA seq
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MSTYLTILGFNSAIPTINSSPTAQFLEMEERSFLIDCGEGTQVQLRKAKAKFSRINHIFI
SHLHGDHCFGLPGLIASFRLLGRETPLHVYGPKGIKKMLETIFTITETHRGFEVVYHELD
KDYSEKIYEDNRVEVFTIPLDHRIYCNGYLFKEKPKERHLNMQEISKYKEIETCDYHNIK
AGKDFVLSDGYVLKNEILTTDPLPPVSYAFCSDTRYLENVIPVIKNATVLYHESTFLHDL
KEMADYTGHTTAMEAAMIARKAEVGKLILGHFSNRYADLTVFTDEARTIFPNTFLPKALE
SVKI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacttatttaacgatattaggctttaactcagcaattcctaccatcaattcttct
cccaccgcacaattcctggaaatggaagaacgatcttttctgatcgactgcggcgaagga
acacaggtacagctgagaaaagcaaaagcgaaattttcgaggattaatcatattttcatt
tctcatcttcatggggaccactgtttcggacttccgggacttattgcgtctttccgttta
ttaggaagagaaacgccactgcatgtatacgggccgaagggaataaaaaaaatgctggaa
accatctttaccattaccgaaacccaccgcggttttgaagtggtttatcatgagttggat
aaagattattctgaaaaaatttatgaagacaacagagtggaggtgttcaccattccgttg
gatcacagaatttattgcaacggatacctttttaaagaaaaaccaaaagaaagacatctt
aatatgcaggaaatatcaaaatataaagagattgaaacctgcgattatcataatattaaa
gcaggaaaagattttgtgttgagtgatgggtatgttcttaaaaatgaaattcttaccacg
gatccattgcctcctgtttcttatgcgttttgcagcgatacgcgctatctggaaaatgta
attcctgttattaaaaatgcgacggttctttatcacgaatctacatttttacatgatcta
aaggaaatggcagattatacagggcatacaactgcgatggaagcagcaatgattgccaga
aaagcagaggtgggaaagcttatcttagggcatttttctaacagatatgcagatcttaca
gtgttcacggatgaagcaagaaccattttccctaatactttcctgccaaaagcattggaa
tctgtgaaaatttaa
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