Chryseobacterium shandongense: EG350_14200
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Entry
EG350_14200 CDS
T05920
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csha
Chryseobacterium shandongense
Pathway
csha00061
Fatty acid biosynthesis
csha00071
Fatty acid degradation
csha01100
Metabolic pathways
csha01212
Fatty acid metabolism
csha02024
Quorum sensing
csha04146
Peroxisome
Module
csha_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EG350_14200
00071 Fatty acid degradation
EG350_14200
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EG350_14200
09145 Cellular community - prokaryotes
02024 Quorum sensing
EG350_14200
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csha01004
]
EG350_14200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csha04147
]
EG350_14200
Enzymes [BR:
csha01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EG350_14200
Lipid biosynthesis proteins [BR:
csha01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EG350_14200
Exosome [BR:
csha04147
]
Exosomal proteins
Exosomal proteins of breast milk
EG350_14200
Exosomal proteins of breast cancer cells
EG350_14200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZA58267
LinkDB
All DBs
Position
complement(3187257..3189026)
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AA seq
589 aa
AA seq
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MNLAEAIIQKNIEKHPLKSAIGFKKKKEGWKELSWKKFSQIIFKTANALKEAGVKENDKV
SIYSDNSSEWMIFDLAALTIGAITVPIYSTNNAEQAEYIIKDSGAKIILVGDQAQYDACL
GILQKNECSLETIIVSKKAVWIKKEFSSFYLEDFIAKSAAEAEFSPKENDDVATLIYTSG
TTGTPKGVMLTHGNFIKAFNAHFEFFKFKNFEEELSLAFLPLSHVFERSWSLLCLYGGAR
VYFLEDPKNIANTLEEVKPTMMCAVPRFFQKIYAGVLEKAEEGSSLKKKIFDWAVKTGWE
TAELRRNEKSIPFGLQIKQTLAETLVFSKIKNKMGGRLWFLPCGGASLSPEVTRFFESVG
IHVTVGYGLTETTATLTLFPFTHFEHGTSGKPLPGVEIRIGDQDEIQARGNGIMKGYYNN
PEDTRKVFTEDGWFKTGDAGKIDEKGNLIITDRLKDLMKTSNGKYIAPQQIENLLTNNNF
IQQIVLIAEGRQFASALIVPDFEFLKEYLAKNNIPFTSWEESVKNQKINDFYKQKIKELQ
EHLSDFEKVKKFTLMPAEFEISTGEITPTLKVKRNVVLKKYAEIIEQMY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgcggaggcaatcattcaaaaaaatatagaaaagcatcccttaaaatctgca
atcggatttaaaaaaaagaaagaaggatggaaagaactgagctggaaaaaattctcgcaa
attatttttaaaacagcaaacgctctgaaagaggcgggggtgaaagaaaatgataaagtt
tccatctattcggacaactcttcggaatggatgatctttgatctggcagcattgacaata
ggagccattacagttcccatttattcaaccaacaatgcggagcaggcagaatacatcatt
aaagattccggggcaaaaattattctggtaggagaccaggcgcaatatgatgcatgttta
ggaattctacagaaaaacgaatgcagcctcgaaacgatcattgtttctaaaaaagcggtc
tggatcaaaaaggaattcagcagcttctatctggaagatttcattgcaaaatcagccgca
gaagcagaattcagtccaaaagaaaatgacgatgttgccacattgatttatacttccgga
accaccgggacaccaaaaggggtaatgcttacccacgggaatttcatcaaagcttttaat
gcccattttgagttttttaaatttaaaaattttgaagaagagctttctctcgcattttta
cctttgagccacgttttcgaacgcagctggagcttactttgcctttacggcggcgcaaga
gtgtactttcttgaagatcccaaaaatattgcgaacacgctggaagaggtgaaacctaca
atgatgtgcgctgttccgaggtttttccagaaaatctatgcaggcgtacttgaaaaggca
gaagaaggttcatcattaaagaaaaaaatattcgactgggccgtaaaaacaggatgggaa
accgcagaattaagaagaaacgaaaaatcaattcctttcggtttgcaaataaaacaaacc
cttgctgaaacgctggtttttagtaaaattaaaaataaaatgggaggaaggctctggttt
ctgccttgtggcggagcttctttgtctcctgaagtaacccgtttttttgaatcggtagga
attcacgttaccgttggatacggacttacagaaactacagcgactctaacgcttttccct
ttcactcattttgagcatggaacgagtggaaaaccacttccgggcgtagaaatccgtatc
ggagatcaggatgaaatccaggccagaggaaacggaattatgaaaggctattacaataat
cctgaagatacccggaaagtgttcacggaagacggctggtttaaaaccggtgatgccgga
aagatcgatgaaaagggaaatcttatcattaccgaccgcctgaaggatctcatgaaaacc
tcaaatggaaaatatattgctccgcagcagattgagaatcttcttaccaataataatttt
atccagcagattgtgctgatagcagaaggaaggcaatttgcttcggcgcttattgttcct
gattttgagtttctgaaagagtatcttgccaaaaataatattccgtttacgagttgggaa
gaatctgtgaaaaaccaaaaaatcaacgatttttataaacagaaaatcaaagaactgcag
gaacatttgtccgactttgaaaaagtgaagaaatttactttgatgccggcagaatttgaa
atcagcaccggagaaatcacgcctacgctgaaagtgaagagaaatgttgttcttaaaaaa
tatgcggagattattgaacagatgtactaa
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