Chryseobacterium shandongense: EG350_15205
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Entry
EG350_15205 CDS
T05920
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csha03009
]
EG350_15205 (rimO)
Enzymes [BR:
csha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EG350_15205 (rimO)
Ribosome biogenesis [BR:
csha03009
]
Prokaryotic type
ribosomal protein modification factors
EG350_15205 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
AZA58450
LinkDB
All DBs
Position
complement(3403111..3404412)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLVREIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVLEAQKLA
KKGTKELILIAQDLTYYGLDIYKRRALGDLLKELVKVEGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSELLKSMKRGTTHEKTDALLAKFREKVPDMAIRTTLIVGYP
GETEEIFQELKNWVREQKFDRLGCFTYSHEENTGAYVLEDNIPQEVKEARVEEIMEIQSQ
ISWKKNQEKIGMVYRCIFDRKEGNYFIGRTEYDSPDVDNTVLVAAEDTYISIGEFANVKI
TSAEEFDLYGELM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatctgtagggaagaagaaaatcaatgtggtaacgcttggatgctccaag
aatgtttatgactctgaagttttgatgagccagctgaaagccaatggaaaagaagttgtt
catgaagacaaaggagatattgtagtaatcaatacctgcggatttatagacaatgccaaa
gaagaatccatcaatactattctagattatgttgaagctaaaaatagaggagaagtagag
aaagtatttgtaacaggatgtctttcggaacgctacaagccggatcttgtacgggaaatt
cctgatgtagaccagtatttcggaacaagggatcttccgattttgcttaagcatcttggg
gcggattataaacatgaacttgtaggagaacgtttaacgaccactccaaaacattacgct
tatcttaaaatttctgaaggctgcgacagaccatgctctttctgtgctatcccgttgatg
agaggaggccacgtttccacaccgattgaaaagctcgttttagaagcgcaaaagcttgct
aaaaagggaacaaaagagttgattcttattgctcaggatcttacttattatggactggat
atttataaaagacgtgcacttggagatttgttaaaagaattggtaaaagtagaaggaatt
gaatggattcgccttcattatgcctttccaagcggtttcccagaagatgtacttgatatt
ataagagaagaaccgaaggtttgcaactatattgatattccgcttcagcatattaactcc
gaattgctgaaatctatgaaaagagggactacgcatgagaaaacggatgcgctccttgca
aaattcagagagaaagttcctgatatggcaatccgtacaacccttattgtaggatatccc
ggtgaaacagaagagatttttcaggaattaaaaaattgggtgagagaacaaaaattcgac
aggctcggatgttttacctattctcacgaagaaaataccggtgcctacgtattagaagac
aatattccacaggaagttaaagaagccagagtggaagagatcatggaaattcagtctcag
atttcttggaaaaaaaatcaggaaaagatcgggatggtgtatcgttgtattttcgaccga
aaggaaggaaactattttataggcagaacggaatatgattctccggatgtcgataatacg
gttttagtagctgcagaagatacctatatttccattggtgaatttgcgaatgtaaaaatt
acttctgccgaagaatttgatctgtatggagaattgatgtaa
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