KEGG   Chryseobacterium shandongense: EG350_15560
Entry
EG350_15560       CDS       T05920                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
csha  Chryseobacterium shandongense
Pathway
csha03030  DNA replication
csha03430  Mismatch repair
csha03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EG350_15560
   03430 Mismatch repair
    EG350_15560
   03440 Homologous recombination
    EG350_15560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csha03032]
    EG350_15560
   03400 DNA repair and recombination proteins [BR:csha03400]
    EG350_15560
Enzymes [BR:csha01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EG350_15560
DNA replication proteins [BR:csha03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EG350_15560
DNA repair and recombination proteins [BR:csha03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EG350_15560
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2
Other DBs
NCBI-ProteinID: AZA58513
LinkDB
Position
3475871..3476635
AA seq 254 aa
MNLKLHKPLCIFDLETTGTNIGRDRIVEICILKVNPDSSRESKTWRVNPEMPIPNECSEI
HGIYDEDVKEAPTFKEIAPKVMEMITGADLGGFNSNRFDVPLLAEELLRVGLDFDLNKFK
LVDAQTIFHKKEPRNLVAAYQFYCGKTLENAHSAEADVMATFEVLDAQVGKYDDIPNEIG
PLSEFTFHNKHADLAGFIGYNEKLEEVFNFGKYKGQCVKVVFKKDLGYYGWLQNAEFPLY
TKKVFTKIQLSSRF
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaatttaaaactacataaaccgctttgcattttcgacctagaaacaacaggaaccaat
atcggaagagacaggattgttgaaatctgtattctaaaggtaaatcctgattcatcaaga
gaaagcaaaacctggagagtaaatccggaaatgcctattcctaacgaatgcagcgagatc
cacggaatttatgatgaagatgtaaaggaagctcctacatttaaagaaatcgctcccaaa
gttatggaaatgattacaggagcggatttgggaggatttaattccaacagatttgatgtt
ccgttattggcagaagaattactgagagtgggattagattttgatcttaataaattcaaa
ttagtagatgcacagacgattttccataaaaaagaaccaagaaatttggtcgctgcctac
cagttctactgtggaaaaacacttgaaaacgcccattctgcagaagccgatgtgatggcc
acttttgaagtgttggatgcacaggtaggaaaatatgacgatatcccgaatgaaatcggg
ccattgagtgagtttacctttcacaataaacatgcggatctggcaggatttatcgggtac
aatgaaaagctggaagaagtttttaactttgggaagtacaaaggacagtgtgtaaaagtt
gtgttcaagaaggatctgggatattacggatggcttcagaatgccgaatttccgttgtac
acgaaaaaggtatttacaaaaattcagttatcaagcagattttaa

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