Chryseobacterium shandongense: EG350_16735
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Entry
EG350_16735 CDS
T05920
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csha
Chryseobacterium shandongense
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csha03400
]
EG350_16735
DNA repair and recombination proteins [BR:
csha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EG350_16735
Archaeal homologous recombinant proteins
EG350_16735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
DUF5798
Motif
Other DBs
NCBI-ProteinID:
AZA58734
UniProt:
A0A3G6MSQ9
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All DBs
Position
3717844..3720879
Genome browser
AA seq
1011 aa
AA seq
DB search
MIPVQLTLEGIYSYQERQKIDFENLTEAGLFGIFGSVGSGKSSILEAISFALYGETERLN
ARDRRTYNMMNLKSNRSYIEFDFINSENKKYRATREFKRNSKNFEDVKTPSVTFYEWKNE
NWIPLDHSNAEQIVGLSYANFKRTIIIPQGQFKEFLELGAAERTNMMKEIFGLQRFDLQN
NVSIINSKNRSELDQLEGQLKGFEEVNEEQISLKKESLKLEQQKFEDILKSFRETENLYS
KLKSLKEDFETLHKKKAHFEKLSEQKENVDLLETKTELYDRLSRIFTPLFSEKTKLAKEI
AEQILSKEQQLTIVQATEHQFEKVKSLLAALQPEYDALQQSKIQENDLSLILQMMKVSGE
IKTLKERTQNGSQKVKEVEDRQKLIQQKIEELSKKSEQLKPGKLDPGLLVHVGNWFLERK
KLNENLSSQTKKADTKKNEIITIHEELKLLKINPETFRDDFRIKAEDVEKQKKFLSEKRN
HLEVQQKLSHFASELHDGEACPLCGALEHPNIVEYHDVTSELHEIQQQIDHLDHQREDIQ
KKLSAGEKVLDRKKIFEEQLKYEEEQVIQIQIQIENHLKKFIWKEFNINDEADFEEKRQH
SFTIEKQLEELSEQIGQEQKNLDKERSHLDNYNKALEKFRLDEAKKEEQIKTNDANLKIL
EWKNYAEKAALEVEEIFNKLSQSNHETEQNYNQLIKEEKEISPKLAGQKTIVSQLEKRIS
ELQQEIADNTLLIEKALAEQQFEQNKVQEILAEKIDVQEAKKIIQEFRIQFETLKNSISE
LEQKLKNFTFDHEEFSTVESRFSSLELDVKAANDSVVKTHAEIERLEKEFKKKEDLLKLL
AQLQKRAENLKIMTNLFKGAGFVQYVSSIYLRQLCDHANVRFHRMTRNQLSLRLNESNEF
EIIDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQSNAKAEKNFFFIDEGFGTQDLE
SVNIVFETLVNLQKENRIVGIISHVEELKEKIPVSLNIIKDEEKGSQIEIV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgattccggttcagcttactttagaaggtatttattcttatcaggaacgtcagaaaata
gattttgaaaatcttacagaggccggacttttcggtattttcggatctgtaggttccggg
aaatcgtcgattctggaagctatttcttttgcgttgtacggagaaacggaaagacttaat
gcccgtgacagacgaacatacaatatgatgaatctgaaatctaacagatcttatattgag
tttgattttatcaattctgaaaataaaaaataccgtgcaacccgtgaatttaaaagaaat
tctaaaaattttgaagatgtaaaaacaccatcggtcacgttttatgaatggaaaaatgaa
aattggattccgctcgatcactccaacgcagagcagattgtgggattaagctatgctaat
tttaaacggactatcatcattccacaaggtcagttcaaagaattcctggaactgggagct
gctgagcgaacgaatatgatgaaagagattttcgggcttcagcgttttgatcttcagaac
aatgtttctattatcaattctaaaaatcgttcagaactggatcaactggaaggacagctg
aaagggtttgaggaagtaaatgaagagcagatctcattgaaaaaagaaagtttaaagctg
gaacagcagaaatttgaagacatcctaaaaagtttcagggaaacggaaaatctctattcc
aaactgaaaagcttaaaagaggactttgaaacactgcataaaaagaaagctcatttcgaa
aagctatccgaacaaaaagagaatgtagatcttcttgaaacaaaaacggagctctacgac
cggctgtctagaatctttacacccctgttttctgaaaaaaccaaactggcaaaagagatt
gcagaacaaatcctgtccaaagaacagcagctgacaattgtacaggctacggaacatcag
tttgaaaaggtaaagagcctccttgcagcactacagccagaatatgacgctctgcagcaa
tcaaaaatccaggaaaatgacctgagcctgattttacagatgatgaaagtttccggagaa
ataaaaacattaaaagaaagaacgcaaaacggttcccaaaaagtaaaagaagttgaagac
agacagaagctgattcagcagaagattgaagaactttctaaaaaatctgaacagttaaag
cccggaaaactggatcccggattgctcgtgcatgtaggaaactggttcctggaaaggaaa
aaattaaatgaaaatctcagcagccagaccaaaaaagctgatactaaaaaaaacgagatc
atcaccattcatgaagagctcaagcttttaaagatcaatcctgaaacctttagagatgat
ttcaggatcaaggctgaagatgtggaaaaacaaaagaaattcctgtcggaaaagcgcaat
catctggaagtccagcaaaagctttcacattttgccagcgaactgcatgacggagaggcc
tgtccgctttgcggcgctctggaacatccgaatattgtggaatatcatgacgtaacttcg
gaactgcatgaaattcagcagcaaattgaccacctggatcatcagagagaagacattcag
aaaaaattatccgccggggagaaagttcttgaccgtaagaaaatctttgaagaacaactg
aaatatgaagaagagcaggtaattcagattcagattcagatcgaaaatcatcttaaaaaa
tttatctggaaagaatttaacataaatgatgaagccgattttgaagaaaaaagacaacat
tctttcaccattgaaaagcaactggaagaactgagtgagcagattggtcaagaacagaaa
aatctcgataaagaaagaagccatctggacaattataacaaggcacttgaaaaattccgg
ctggatgaagccaaaaaagaagagcagattaaaaccaatgatgccaatctgaaaattctg
gaatggaaaaattatgctgaaaaagcggctttggaagtggaagaaatctttaacaaactc
tcacaatccaaccacgaaacggagcagaactataatcaattaattaaagaagaaaaggaa
atttcaccgaaactcgccggacaaaagactattgtcagtcagcttgaaaaaagaatttcc
gagttgcagcaggaaatcgcagataataccttattaattgaaaaagcattagcagaacaa
caatttgagcagaataaagtgcaggaaattctggcagaaaaaattgatgttcaagaagca
aaaaaaatcatccaggaattcagaatacagtttgaaacgttgaaaaacagcatctctgaa
ctggagcagaaactaaaaaattttacttttgaccatgaagaattttcgacggttgaaagc
cgcttttcttctcttgagcttgacgtaaaagcagccaatgacagcgttgtaaaaacccat
gcggaaattgaaaggctggagaaagagtttaagaaaaaagaagatcttttaaagcttttg
gcacagctccagaaacgggcggaaaatctcaaaattatgacgaaccttttcaaaggagca
ggatttgtacaatatgtttcctccatttacctgcgtcagctttgtgatcatgcaaatgta
cgttttcacaggatgacaagaaatcagctgagtcttcggcttaatgaaagcaatgagttt
gaaatcatcgattacctcaacgaaggccgaagcagaagtgtaaaaacactttcgggagga
caggccttccaggtttcactgagtctggctttagctttggcagaaagtgttcagagcaat
gcaaaagcggaaaaaaacttcttctttatcgatgaaggattcggaacacaggatctggaa
tcggtaaatatcgtttttgaaacacttgtcaatcttcagaaagaaaacaggattgtaggc
atcatttcccacgtagaagaactgaaggaaaaaattcccgtatcgcttaacatcatcaag
gatgaagaaaaaggaagccaaattgaaatcgtataa
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