Chryseobacterium shandongense: EG350_18520
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Entry
EG350_18520 CDS
T05920
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
csha
Chryseobacterium shandongense
Pathway
csha00521
Streptomycin biosynthesis
csha00523
Polyketide sugar unit biosynthesis
csha00525
Acarbose and validamycin biosynthesis
csha00541
Biosynthesis of various nucleotide sugars
csha01100
Metabolic pathways
csha01110
Biosynthesis of secondary metabolites
csha01250
Biosynthesis of nucleotide sugars
Module
csha_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EG350_18520 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EG350_18520 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EG350_18520 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EG350_18520 (rfbB)
00525 Acarbose and validamycin biosynthesis
EG350_18520 (rfbB)
Enzymes [BR:
csha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EG350_18520 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_10
Sacchrp_dh_NADP
NmrA
KR
TAF1D
Motif
Other DBs
NCBI-ProteinID:
AZA59058
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All DBs
Position
4101301..4102380
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AA seq
359 aa
AA seq
DB search
MKNIIITGGAGFIGSHVVREFVKNNPQTTIINLDALTYAGNLENLKDIENEPNYVFEKAD
ITKPEELRKVFEKYNPDAVVHLAAESHVDRSITDPMAFINTNVNGTANLLNLCKEFWALN
PDHTHGRFPDEKRTNLFYHISTDEVYGSLGETGFFLEITPYDPQSPYSASKAASDHLVRA
YGNTYGMPFIVSNCSNNYGPNHFPEKLIPLCISNIINEKPLPIYGDGKYTRDWLFVIDHA
KAIHQIFNKAKTGETYNIGGFNEWQNIDLVKELIKQMDEKLGRPQGYSEKLITFVKDRPG
HDKRYAIDATKLNKDLGWKPSVTFEEGLAKTIDWYLENKEWLENVTSGDYQKYYEKQYH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataatcattacaggaggagcaggttttattggttcccacgttgtaagagaa
tttgtgaaaaataatccgcaaacgacgattattaacctcgatgcgctcacctatgcagga
aatcttgaaaatttaaaggatattgaaaatgagccgaattacgttttcgagaaggcagat
atcacaaaacctgaagaattaagaaaagtttttgaaaaatacaatccggatgctgttgta
catttagctgcagaaagccatgtagacagaagcatcacggatccgatggcgtttatcaat
accaatgtaaatggtaccgcaaatcttttaaatttatgtaaagagttctgggctttgaat
cctgatcatacccacggaagatttccggatgaaaaaagaacgaatcttttctatcacatc
tctaccgacgaagtctatggaagtttgggcgaaaccggattcttcttagaaattactcca
tacgatccgcagtctccttattccgcctcaaaagctgcatccgatcatttggtacgagcc
tacggaaatacgtacggaatgcctttcatcgtatcaaactgctcaaataattatggcccg
aatcatttcccggaaaaattaattcctctttgtatatccaatatcatcaatgaaaaacct
ttgccaatttatggtgacggtaaatatacaagagactggctttttgtgattgatcacgcg
aaagcgatccatcagatttttaataaggctaaaacgggagaaacttacaatatcggagga
ttcaatgaatggcagaatattgatctggtaaaagaacttatcaaacaaatggacgaaaaa
ctgggcagaccgcaaggctattctgaaaagcttatcacatttgttaaagacagacccgga
catgataaaaggtatgccattgatgcaacaaaattgaataaagatcttggatggaagcca
tcggtaacttttgaagaaggattggctaaaaccatcgactggtatcttgaaaataaagag
tggctggaaaatgtgacaagcggagactaccagaaatattacgaaaaacaatatcattaa
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