Chryseobacterium shandongense: EG350_18860
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Entry
EG350_18860 CDS
T05920
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
csha
Chryseobacterium shandongense
Pathway
csha02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EG350_18860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_18860
Enzymes [BR:
csha01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EG350_18860
Transporters [BR:
csha02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EG350_18860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA
ABC_ATPase
AAA_22
AAA_29
AAA_16
APS_kinase
MMR_HSR1
nSTAND3
AAA_25
AAA_24
AAA_23
AAA_5
NACHT
DUF87
AAA_14
DEAD
NB-ARC
PPV_E1_C
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AZA59125
LinkDB
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Position
4176232..4178061
Genome browser
AA seq
609 aa
AA seq
DB search
MSYYKRAIDNILPYKKTIAAGIFFNILYALFNIIAMLFFMPVLNILFDKEAEKINQQPTY
EGISKAGTFLKESFNYQIQQVQMEKGPEYILLITCILFISMFFLRNIFSYLSEFYLTFSR
TGVSRDFRIKLHDKILDLPVSFFTNSRKGDVFARITSDVSEVEGNILNSLIDLIRSPIVI
IITMGYLLYSNFQLTIFTLIVFPIMGTLISIIGKSLKKDTGEAQNELGKMYSFVDETLVG
LKIIKIFDASPQIKKRFDEVLNNIRRLSLKLFKKKALASPVSELLGAITIGMIVYFGGRL
AIQGKGLSGSEFITYIALFYTILQPLKALSSAISNIQKGEVSAKRIFEILDADYHIKEMK
HAKEIRSFERNVEFRNITFGYEDREVLQNFSLSIPKGKTVALVGQSGSGKSTLANLITRF
YDVNKGEVLIDGENIINIKLSSYRKLFGLVTQDNILFNDSIRNNISLGKPDATLEEIQAA
AKIANAHDFIMDLPKQYDTSIGEAGGKLSGGQKQRISIARAVLKNPPIMILDEATSALDT
ESERFVQDALEKMMENRTSLVIAHRLSTIQKADWIVVMEKGKIIEQGTHHDLIAKKGMYN
KLVELQNFD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagttactataaacgagcgatagataacatactcccctataaaaaaacaattgctgcc
ggaattttttttaatattttatacgcactgttcaatattattgccatgcttttcttcatg
ccggtgctaaatattctttttgataaagaagcagaaaagattaatcaacaacctacgtac
gaaggcatttcaaaagccggaacatttttaaaggaaagcttcaattatcagattcagcag
gtacagatggagaaaggaccggaatatattcttcttatcacttgtattttatttatatcc
atgttcttcctgagaaacatatttagttatttgtcagagttttacctcacattttcacga
acaggagtttcaagagatttcagaataaaactgcatgataaaattttagatttacccgta
tcgttttttacaaactccagaaaaggtgatgtcttcgctagaataacctcagacgtaagt
gaagtagaaggtaatattctaaatagtttaattgatcttatccggtcaccaattgtaatc
atcattacaatgggatatcttttatattctaattttcagcttaccatttttacattgatt
gttttcccgatcatgggtaccttaatttcaataatcggaaaaagtctgaaaaaagatacc
ggagaagcccagaatgaattgggaaaaatgtattcttttgtagatgaaacactggtagga
ctgaaaattattaaaatttttgacgcttcacctcagattaagaaaagatttgatgaagtc
ctcaataatataagaagactttccttaaaactttttaagaaaaaagctctagcttctccg
gtgagtgagcttttaggcgctatcaccataggaatgattgtttattttgggggcaggctg
gctattcaggggaaaggattatccggaagcgaattcataacctatattgctttattttat
acgattctgcagcctttgaaagccctgtcttcagccatctccaatattcagaaaggagag
gtttctgccaaaagaatttttgagatcttggatgcagactatcatattaaagaaatgaag
cacgctaaagaaatcaggagttttgaaagaaatgtagaattcagaaatattacattcgga
tatgaagaccgtgaagtgctgcaaaatttttcactttctattccgaaaggtaaaaccgta
gcactggtaggacagagcggcagtggaaaaagtacattggcgaatcttataacacgtttt
tatgatgttaataaaggtgaagttcttattgacggagaaaatattatcaatataaaactt
tccagctacagaaaattatttgggttggtaacacaggacaatatactattcaacgattct
atccgaaataatatatccctgggtaaacctgatgctaccttggaggaaatccaggcagca
gcaaaaattgccaatgcccacgacttcatcatggatcttccaaagcaatacgataccagt
atcggcgaagccggaggaaaactttcaggcggccagaaacaaaggatttctattgcacgg
gcggtcctgaaaaatccgccaattatgattctcgatgaagccacttcagcattggatacc
gagtctgaaagatttgtacaggatgccttggaaaaaatgatggaaaacagaacttctcta
gttattgcacaccgtctttcaaccattcagaaagcggactggattgtggtaatggaaaaa
ggaaaaattatagagcagggaacccatcatgatcttatcgccaagaaaggcatgtacaac
aagctggtggaactgcaaaatttcgattaa
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