Campylobacter showae: CSHOW_0159
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Entry
CSHOW_0159 CDS
T07015
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
csho
Campylobacter showae
Pathway
csho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSHOW_0159 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csho03400
]
CSHOW_0159 (nfo)
Enzymes [BR:
csho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CSHOW_0159 (nfo)
DNA repair and recombination proteins [BR:
csho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CSHOW_0159 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QCD48144
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All DBs
Position
complement(166812..167651)
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AA seq
279 aa
AA seq
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MKFIGAHVSIAGGVENAPLNAANIGANAFAMFVKNQRQWEAKPLSQENISKFKQNLKASH
IEPRHVLPHNGYLINLGHPNDEQRQKSINAFLDEIYRVEALGLMMINFHPGSYLNEISPE
ICLENIANSVNFLLENSQNVRLVIENTAGQGSNLGFKFEHLAYIIKRCTDKSRIGVCLDT
CHTFAAGYDIRDDYERVMSEFDEIVGRGMLRGMHINDTKFDLASKKDRHESLGKGFLGLK
TFENIINDPRTDDIPLVLETIDESIWADEIKILRNFKGE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcggcgcgcacgtcagcatcgcgggcggcgtagaaaacgctccgctaaat
gcggcaaatatcggcgcaaacgcctttgcgatgttcgtcaaaaatcagcgccaatgggag
gccaagccgctttcccaggaaaatatctccaaatttaagcaaaatttaaaagcctcccat
atcgagcccaggcacgttttgcctcacaatggctatcttataaatttaggccatccaaac
gatgagcagcgccaaaagtccattaacgcctttttggatgaaatttaccgcgtagaggcg
ctcggtctaatgatgataaattttcatccgggctcgtatctaaatgaaatttcgccagaa
atttgcctcgaaaatatcgcaaactccgtaaatttcctactcgaaaatagccaaaacgta
aggctagtcatcgaaaataccgccggccagggctcaaatttgggctttaaatttgaacac
ctagcctacatcatcaaacgctgtaccgataaaagcaggatcggcgtgtgcctcgacacc
tgtcatacctttgccgcgggatacgatatcagagacgactacgagcgcgtgatgagcgaa
tttgacgagatagtcgggcgcggtatgctgcggggtatgcatataaacgatacgaaattt
gacctagccagtaaaaaggatcgccacgagagcctaggcaaaggctttttgggcttaaaa
acatttgaaaacatcataaacgacccccgcacggacgatatcccgctagttttagagacg
atcgacgaaagcatctgggcggacgagataaaaattttaagaaactttaaaggagaataa
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