Campylobacter showae: CSHOW_0533
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Entry
CSHOW_0533 CDS
T07015
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
csho
Campylobacter showae
Pathway
csho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CSHOW_0533 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csho01007
]
CSHOW_0533 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csho03016
]
CSHOW_0533 (lysS)
Enzymes [BR:
csho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CSHOW_0533 (lysS)
Amino acid related enzymes [BR:
csho01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CSHOW_0533 (lysS)
Transfer RNA biogenesis [BR:
csho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CSHOW_0533 (lysS)
Prokaryotic type
Other AARSs
CSHOW_0533 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QCD48490
LinkDB
All DBs
Position
549511..551016
Genome browser
AA seq
501 aa
AA seq
DB search
MIFENQLEIQRLETANELRSAGVNPYPHFLRRDMDITKFRLKFKHIIDTEEKSAEGQLVS
LAGRVKLIRDAGKAIFANIEDEDGNLQIYFSNKTLDPNWFKVVKKNIEVGDIIYVRGYAF
VTRTGEFSMHVSELTLASKAISPLPEKFHGLTDIETRYRQRYLDMIMNPEVRADFKRRSV
IVSTIRRFFEDKGFLEVETPMMHPIPGGANAKPFVTFHNALGVERFLRIAPELYLKRLIV
GGFDAVYEMNRNFRNEGMDLTHNPEFTSIEFYWAWHTYHDLMGLTEELFNVLLDKLDMPK
IIEFDGMQIDFSKPFKRISYKKALVEIGGLDEAIIGDKDKILAKLKADGFEANAKLDLGH
LQAELFDNYVESKLTDPTFIIDYPISISPLSRRSDADPNIAERFELFIAGRELANGFNEL
NDPIDQYGRFASQIEAKNAGDDEAHEMDEDYVRALGYAMPPTAGQGIGIDRLVMLLTNKK
SIRDVVLFPAMRPQKNETKEN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgatatttgaaaatcaactggagatccagaggctagagactgcaaatgagttaagaagc
gcgggcgtaaatccctatccgcactttttgcgccgcgatatggatataactaaatttaga
cttaaatttaaacacattatagacactgaagaaaagagtgccgaaggtcagctagtaagc
ctcgccggacgcgtaaagctcatcagggatgctggcaaggcgatatttgccaacattgaa
gacgaggacggcaatcttcaaatttactttagtaataagacgcttgatcctaattggttt
aaggtcgtaaagaaaaatatcgaagtaggcgacataatatacgtgcgcggatatgccttc
gtcacgcgaacgggcgaattttctatgcacgttagcgaactaactttagcgtcaaaggcc
atttcgccgcttccagagaaatttcacggactaacggatatagagactagatatcgtcag
agatacctcgatatgataatgaatccagaggtcagagctgattttaagcgccgctcggtt
atcgttagcacgattcgcagatttttcgaggataagggctttttggaggtcgagactccg
atgatgcaccctatccctggcggagcgaacgctaagcctttcgttacgtttcataacgca
cttggcgtggagagatttttacgcatcgcgcctgagctttatctaaagcggctcatagtg
ggcggttttgatgccgtttacgagatgaatagaaatttccgcaacgagggtatggactta
acgcacaatccagaatttaccagcattgagttctactgggcgtggcatacttatcacgat
ttgatggggctaaccgaggagctatttaacgtgcttcttgataaactagatatgcctaaa
atcatcgaatttgacggtatgcagatcgattttagcaagccgtttaaacgcataagctac
aaaaaagcactcgtagaaatcggcggtctagacgaggcgatcatcggcgataaggataaa
attttagctaagctcaaggcggacggctttgaggcaaacgcaaagcttgatttagggcat
ttgcaagccgagctttttgataactatgtagaaagcaagctaaccgatccgacgtttatc
atagactatccgatttcgatcagcccgctttctcgcagaagtgatgcagatcctaatatc
gcggagagatttgagctgtttatcgcagggcgcgagctagcaaatggctttaacgagtta
aacgatccgattgatcaatacggccgcttcgcttcacaaatcgaagctaaaaatgcagga
gacgatgaagctcacgagatggacgaggactatgtgagggctcttggctacgcgatgcct
ccgactgcggggcagggcatcggtatagataggctcgtgatgctactaaccaataaaaaa
tccatccgcgacgtggtacttttcccggcgatgagaccgcaaaaaaacgaaaccaaggag
aattaa
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