Campylobacter showae: CSHOW_0593
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Entry
CSHOW_0593 CDS
T07015
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csho
Campylobacter showae
Pathway
csho03030
DNA replication
csho03430
Mismatch repair
csho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSHOW_0593 (dnaE)
03430 Mismatch repair
CSHOW_0593 (dnaE)
03440 Homologous recombination
CSHOW_0593 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csho03032
]
CSHOW_0593 (dnaE)
03400 DNA repair and recombination proteins [BR:
csho03400
]
CSHOW_0593 (dnaE)
Enzymes [BR:
csho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSHOW_0593 (dnaE)
DNA replication proteins [BR:
csho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSHOW_0593 (dnaE)
DNA repair and recombination proteins [BR:
csho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSHOW_0593 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCD48548
LinkDB
All DBs
Position
618365..622345
Genome browser
AA seq
1326 aa
AA seq
DB search
MSDFTDFTHLHLHTEYSLLDGANRIKELAKTLKKQGVKAAAITDHGNMFGAIDFYKTMKN
EGIKPLIGIEAYIHNGEELGDKSTKQRFHLCLIAKNEIGYKNLMYLSSMSYIEGFYYYPR
INKKILKEHSEGIICSSACLQGEVNWNLNQSERNLRFGAGGYEAAKEAALWYKEVFGDDF
YLEIMRHGIGDQRRIDDEILRLAKELNIKVIATNDTHYTFKQRADAHEVFMCIAMNKLLD
DPNRLRHSVHEFYVKTPAQMSELFADIPEAVTNTQEIVDKCDLSIKLGDATPPNFKFTLE
YAAERNLSLPEPDKRYSIPNDSVLFEHECRQGLEERLKFVTAERHEEYRTRLQREIDIIN
KMNFPGYMMIVWDFINEAKKRGVPVGPGRGSAAGSLVAYSLKITDLDPLPYNLLFERFLN
PERVSMPDIDVDFCQNRRGEIIDYVIEKYGKFNVAQVITFGKLLAKGVIRDVARVCDMPY
AEADAMAKLIPDELGITLEQAFEKEPKIGELIASNSNANRIWKFALDLEGLNRNAGMHAA
GVVISNEELWNKTPLFRQPNAEEDHFVTQYSLKYLEDVDLIKFDFLGLKTLTVIDNAVKL
VKKRFGKEIIWEQVNKNDPKTYETISSGQTLGLFQIESEGMQKVGADMRPDCFEDIIAMI
SLYRPGPMDLIPDFIKRKHGLEPITYIFPELQPILEPTYGVIVYQEQVMQIVQTIGGFSL
GGADLVRRAMGKKIKEEMDRLKGKFIEGAEAQGLDGKKADELFELILHFASYGFNKSHAA
AYTYVTFQTAYLKTYYPAEFMAALITSEETNADKISRYIDECKRLDIAILPPSVNKSAKE
FSVVSEGGKDAIIYGLGAIKGVGGAAIENILEEQAKGEFKDIDDFVSRVDNFKVNKKVFE
SLIKSGSFDSFGLTRKMMLNNLDNIVEACKNAATIKKNAAESLFGDDESMATVKTSLVRD
DSELELKTKLKFELESVGIYLSGHPLDEYREQISKIKYTLSDKFDELPENGEMLLVGKIE
DLTTRISKKNGKKMGTIEMLDFHGTVEIAVFDRGLGAVESMSADERDLPHAFKVRYSKDG
QFMRINLDKILTLDEAMGMDFSHPLEKYKEQIEQIKHTPSKDFGKIDKTSEILVVGKIAE
IAKIPSKKTGKEFMMLSVMDLFGTFKVAAFDSEKGLIESLTGEQKDAPLAFKVRYSRDDQ
GTRINLIDVVSLEDARDMNFQSRSFRQRKESSSGSYQNSSAASESRGKRELEDLVLELNL
DETGKDLITQIYRAAIGEHRAAADKNNKRLIIRIKDVQEGRALVYTTEFIVGDGFEGRAL
GLKQAV
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttacagattttacgcacctgcacctgcatacggagtattcgctgctagac
ggcgccaaccgtatcaaagagctagccaaaaccctaaaaaaacaaggcgtcaaagccgca
gccatcaccgaccacggcaatatgtttggcgctatagacttttataaaacgatgaaaaat
gaaggcataaagccgctcatcggcatcgaagcctacatccacaacggcgaggagctcggg
gataaaagcaccaaacagcgctttcacctctgcctcatcgccaaaaacgaaatcggctac
aaaaacctgatgtatctgagctccatgagctacattgaggggttttattattatccgcgt
atcaacaaaaagatactaaaagagcacagcgagggcatcatctgctcatcggcgtgcctg
caaggcgaggtgaactggaacctcaaccaaagcgagcgaaatttgcgtttcggcgctggc
ggatacgaggcggcaaaggaagccgcgctatggtataaagaggtcttcggcgatgatttt
tacctcgagatcatgcgccacggtatcggcgatcagaggcggatcgacgatgagatcttg
cgcctggcaaaggagctaaatatcaaggtcatcgcaaccaacgacacgcactacacgttt
aagcaaagagccgatgcgcacgaggtttttatgtgtatcgcgatgaacaaactgcttgac
gatccaaaccgcctgcgccacagcgtgcatgagttttacgtcaagacgcctgcgcagatg
agcgagcttttcgccgatatcccagaagccgttacaaacacgcaggaaatcgttgataaa
tgcgacctctctatcaagctaggcgacgctacgccgcccaattttaaatttacgcttgag
tacgccgccgagcgaaatttgagcctgcccgagcctgataaacgatacagcataccaaac
gacagcgtgttgtttgagcacgagtgcaggcaggggctagaggagaggctgaaattcgtc
accgcagagcgccacgaggagtatcgcacccgtctgcagcgtgagatagacatcataaac
aagatgaactttcctggctatatgatgatcgtttgggactttatcaacgaagctaaaaag
cgcggcgtgccggtaggcccgggacgcggctctgcggcgggaagcctagttgcgtatagt
ctaaagatcaccgaccttgatccgctaccctataacctgcttttcgagcgttttttgaac
ccggagcgcgttagcatgcccgatatcgacgtggacttttgtcaaaaccgccgtggcgag
atcatcgactacgtcatcgaaaagtacggtaaatttaacgtcgcgcaggttattacattt
ggtaagttgctggcaaagggcgtcatccgcgacgtcgcgcgcgtatgcgatatgccctac
gccgaggcggacgctatggcaaaactcatcccggacgagctaggcatcacactagaacaa
gcctttgaaaaagagccaaagatcggcgagctgatagcaagcaactcaaatgcaaataga
atctggaaatttgcccttgacctcgagggtctaaaccgaaacgccggtatgcatgccgca
ggcgtagtcatctcaaacgaggagctgtggaacaaaacaccgcttttccgccagccaaac
gccgaggaggatcacttcgtcacgcagtatagcctaaagtacctagaggacgttgactta
atcaaatttgacttcctggggctaaagactctaaccgtgatagataacgccgttaagctc
gtaaaaaagagattcggtaaagagataatctgggagcaggtcaataaaaacgacccaaaa
acctacgagacgatcagtagcggccagacgcttgggctgtttcagatagagagcgaaggc
atgcaaaaagtcggagccgatatgcgccccgactgcttcgaggatatcatcgcgatgatc
tcgctttatcgcccgggcccgatggatcttataccagatttcatcaagcgcaagcacggc
ctggaacctatcacgtacattttccctgagcttcagcccatactagagcccacctacggc
gttatcgtatatcaagagcaagttatgcaaatcgtgcagactatcggcggcttttcgcta
ggaggtgcggatctcgtgcgccgcgcgatgggtaaaaagataaaagaggagatggatagg
ctaaagggcaaatttatcgagggagccgaggcgcagggactagacggcaaaaaggccgac
gagctgtttgagcttattttgcacttcgcttcgtacggatttaacaaatcccacgccgca
gcctacacctacgtgacctttcaaacggcgtatctaaagacctactatccggccgaattt
atggcggctctcatcactagcgaggagaccaatgccgataaaatttcgcgctacatcgac
gagtgtaagcgcctagatatcgctatcctgccgccatcggtcaataaatctgccaaagaa
ttctcagtcgttagcgaagggggtaaggacgccatcatctacggcctaggcgcgataaaa
ggcgtcggaggcgcggcgatagaaaatatcttagaggagcaggccaagggcgagtttaag
gacatcgacgacttcgtctcgcgcgtggataactttaaggtaaataaaaaagtctttgaa
agcctgataaaatctggctcatttgatagctttggcctaacgcgcaagatgatgctaaac
aacctagataacatcgtagaggcgtgcaaaaacgccgctaccatcaagaaaaacgcggcc
gagagcctatttggcgacgacgagagcatggcgacggttaaaactagtctcgtacgcgac
gactctgaactagagctaaaaaccaagctcaaatttgagctagaaagcgtgggtatctac
ctctcgggccacccgttagacgagtaccgcgagcaaatctcaaagataaaatacactcta
agtgataaatttgacgagctaccggaaaacggcgagatgctgttagtcggcaagatagag
gatctcaccacaaggatcagcaagaaaaacggcaaaaaaatgggtacgatcgagatgctc
gattttcacggtacggtcgagatcgcggtctttgacagaggccttggcgcggtcgagtcg
atgagcgcggacgagcgcgatctaccgcatgcgtttaaggttcgctactccaaagacggg
cagtttatgcggataaatttggataaaattttaactcttgacgaggctatgggcatggac
ttttcgcatccgctcgaaaaatacaaagagcaaatcgagcagataaaacacactcctagc
aaggactttggcaagatagataagaccagcgagatcctagtcgtcggcaagatcgccgag
atcgctaaaatccctagtaaaaaaaccggcaaagagtttatgatgctaagcgtcatggac
ctttttggcacgtttaaggttgcggcgtttgactccgaaaaagggctcatcgagagccta
acgggcgagcaaaaggacgctccactagcctttaaggtgcgctactcgcgcgacgatcag
ggcactcgcataaatctaatcgacgtcgtgagcctagaggacgcgcgcgatatgaatttc
caaagcagaagctttaggcagcgtaaggaaagtagcagcggcagctaccaaaacagctca
gccgctagcgaaagtagaggcaaaagagagcttgaggatctggtgttagaactaaatttg
gacgaaacgggcaaggatctcatcacgcaaatttaccgcgccgccatcggcgaacaccgc
gctgcagccgataaaaacaacaagcgcctgatcatccgtatcaaagacgtgcaggaaggc
cgcgcgctggtttatacgacggagtttatcgtgggggatgggtttgaggggagggcttta
gggctaaaacaagccgtttaa
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