KEGG   Campylobacter showae: CSHOW_0834
Entry
CSHOW_0834        CDS       T07015                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
csho  Campylobacter showae
Pathway
csho02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:csho00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CSHOW_0834 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csho03021]
    CSHOW_0834 (rpoD)
Transcription machinery [BR:csho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CSHOW_0834 (rpoD)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_ner Sigma70_r4_2 TelK_muzzle RTX_C MCR_beta_N SieB
Other DBs
NCBI-ProteinID: QCD48776
LinkDB
Position
complement(853022..854905)
AA seq 627 aa
MSTAKKEALSLIEELFKENAKGYITYEKLVKFLDKAPTAAIAKKIESLAKENKVQLITSA
EIAKMRNIEDAKKRREELAKLADDNLEEEFDLASETDLLEWSRSDSPVRMYLREMGQIAL
LTKEEEVEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFRSFDDEGE
EGSEEVEEEEENEEVEDDVEEGEEKEAKPKKHNKKDDKRAEKVIESFKALEKAKKEWLKT
ANKQNEVETEDEFLAKITLAFKKKILKDKLMDLGPTSKLITEIVKSMETALKSDDEFDRE
LKRLEYKLPMFSDELKKNHKSILKDIIKLSKEDIIARVPEATMVSTYVEIKKLFATKEAS
KSGFNLDPILLKEILEQIKRGKKISDEAKARMAKSNLRLVVSIAKRYTNRGLPFLDLIQE
GNIGLMKAVDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKIN
RKYLQEEGKEPDINVIAAEVGLSADKIKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRS
SLSPMDHILKNDLKEQIDEVLDQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRER
VRQIESSAIKKLKHPKVGRKLKNYIEG
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgagtaccgcaaaaaaagaggcattgtcgctcatagaagagcttttcaaagaaaatgcc
aaaggctatatcacttacgaaaaacttgttaaatttctagacaaagcgccgacggcagcg
atagcaaaaaaaatagaatcgctggcaaaagaaaataaagtccagctcataacctcggct
gaaatcgcaaaaatgcgcaacatcgaagatgctaaaaagcgccgcgaggagctagcaaaa
ctagccgacgacaatctggaagaagaatttgacctcgccagcgaaacggacctgctcgag
tggtcgcgctcggatagcccagtgcgtatgtatctgcgcgaaatgggtcaaatcgcgcta
ctaaccaaagaagaagaagtagaaatcagcaaaaaaatcgaacttggcgaagatatcatc
atcgacgcattttgctcggtaccataccttatcgattttattcttgactacaaagagccg
cttataaaccgcgaacgccgcgtaaaagagctttttagaagctttgacgacgaaggtgag
gaaggtagcgaagaggtcgaagaagaggaagaaaacgaagaagtcgaggatgatgtcgag
gaaggcgaagagaaagaagccaagccaaaaaaacacaataaaaaagacgacaaacgagcc
gaaaaagtaatcgaaagctttaaagcgctcgaaaaggccaaaaaagagtggttaaaaact
gcaaataaacaaaacgaagtagagactgaggatgagtttttagcaaagataacgcttgcg
tttaaaaagaaaattttaaaagacaagctaatggatctaggccctaccagcaagctcata
accgagatcgtaaagtcgatggaaacggcgctaaagagcgatgatgaatttgacagagag
ctaaaaagactcgagtataagctgcctatgtttagcgacgagctaaagaaaaatcacaag
tcgatcctaaaagatatcatcaagctcagcaaagaagatataatcgcgcgagtacccgag
gctacgatggtatcaacctacgtggagatcaaaaagctatttgcgaccaaggaagcgagc
aagagcggatttaacctagatccgatacttttaaaggaaattttagagcagatcaaacgc
ggcaaaaagatatccgacgaagcaaaagctaggatggcaaagtcaaatttacgtcttgtc
gtaagtatcgccaagcgctacacgaaccgcggtttgccgtttttagacttgattcaagag
ggcaatatcgggctaatgaaagcggttgataaatttgaatataaaaaagggtataaattt
tctacctatgcgacgtggtggatacgtcaggctattagccgcgctatcgctgatcaagca
cgcacgatacgcatacctatccatatgatagaaacgataaaccgtatcaacaaaatcaac
cgaaaatacttacaagaagaaggcaaagagcctgatataaacgtaatcgcagccgaggtc
ggactaagcgcggacaagataaaacaggtcatcaaaataaccaaagagcctatcagccta
gaagctcctatcggcaacgaagacgacggtaaatttggagattttgtcgaggatagaagc
tcgctaagcccgatggatcacatcctaaaaaacgatctaaaagagcagatcgacgaagtc
ctggatcagctaaacgagcgcgaaaaagccgtcatcaggatgagatttggccttttagat
gacgagagcgaccgcacgctagaagagatcggcaaagagctaaacgtaacacgcgagcgc
gtccgccagatcgaaagctctgcgatcaaaaaactaaagcacccaaaagtcggtagaaaa
ctcaaaaactacatcgagggctaa

DBGET integrated database retrieval system