Campylobacter showae: CSHOW_0834
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Entry
CSHOW_0834 CDS
T07015
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
csho
Campylobacter showae
Pathway
csho02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSHOW_0834 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csho03021
]
CSHOW_0834 (rpoD)
Transcription machinery [BR:
csho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSHOW_0834 (rpoD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_ner
Sigma70_r4_2
TelK_muzzle
RTX_C
MCR_beta_N
SieB
Motif
Other DBs
NCBI-ProteinID:
QCD48776
LinkDB
All DBs
Position
complement(853022..854905)
Genome browser
AA seq
627 aa
AA seq
DB search
MSTAKKEALSLIEELFKENAKGYITYEKLVKFLDKAPTAAIAKKIESLAKENKVQLITSA
EIAKMRNIEDAKKRREELAKLADDNLEEEFDLASETDLLEWSRSDSPVRMYLREMGQIAL
LTKEEEVEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFRSFDDEGE
EGSEEVEEEEENEEVEDDVEEGEEKEAKPKKHNKKDDKRAEKVIESFKALEKAKKEWLKT
ANKQNEVETEDEFLAKITLAFKKKILKDKLMDLGPTSKLITEIVKSMETALKSDDEFDRE
LKRLEYKLPMFSDELKKNHKSILKDIIKLSKEDIIARVPEATMVSTYVEIKKLFATKEAS
KSGFNLDPILLKEILEQIKRGKKISDEAKARMAKSNLRLVVSIAKRYTNRGLPFLDLIQE
GNIGLMKAVDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKIN
RKYLQEEGKEPDINVIAAEVGLSADKIKQVIKITKEPISLEAPIGNEDDGKFGDFVEDRS
SLSPMDHILKNDLKEQIDEVLDQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRER
VRQIESSAIKKLKHPKVGRKLKNYIEG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgcaaaaaaagaggcattgtcgctcatagaagagcttttcaaagaaaatgcc
aaaggctatatcacttacgaaaaacttgttaaatttctagacaaagcgccgacggcagcg
atagcaaaaaaaatagaatcgctggcaaaagaaaataaagtccagctcataacctcggct
gaaatcgcaaaaatgcgcaacatcgaagatgctaaaaagcgccgcgaggagctagcaaaa
ctagccgacgacaatctggaagaagaatttgacctcgccagcgaaacggacctgctcgag
tggtcgcgctcggatagcccagtgcgtatgtatctgcgcgaaatgggtcaaatcgcgcta
ctaaccaaagaagaagaagtagaaatcagcaaaaaaatcgaacttggcgaagatatcatc
atcgacgcattttgctcggtaccataccttatcgattttattcttgactacaaagagccg
cttataaaccgcgaacgccgcgtaaaagagctttttagaagctttgacgacgaaggtgag
gaaggtagcgaagaggtcgaagaagaggaagaaaacgaagaagtcgaggatgatgtcgag
gaaggcgaagagaaagaagccaagccaaaaaaacacaataaaaaagacgacaaacgagcc
gaaaaagtaatcgaaagctttaaagcgctcgaaaaggccaaaaaagagtggttaaaaact
gcaaataaacaaaacgaagtagagactgaggatgagtttttagcaaagataacgcttgcg
tttaaaaagaaaattttaaaagacaagctaatggatctaggccctaccagcaagctcata
accgagatcgtaaagtcgatggaaacggcgctaaagagcgatgatgaatttgacagagag
ctaaaaagactcgagtataagctgcctatgtttagcgacgagctaaagaaaaatcacaag
tcgatcctaaaagatatcatcaagctcagcaaagaagatataatcgcgcgagtacccgag
gctacgatggtatcaacctacgtggagatcaaaaagctatttgcgaccaaggaagcgagc
aagagcggatttaacctagatccgatacttttaaaggaaattttagagcagatcaaacgc
ggcaaaaagatatccgacgaagcaaaagctaggatggcaaagtcaaatttacgtcttgtc
gtaagtatcgccaagcgctacacgaaccgcggtttgccgtttttagacttgattcaagag
ggcaatatcgggctaatgaaagcggttgataaatttgaatataaaaaagggtataaattt
tctacctatgcgacgtggtggatacgtcaggctattagccgcgctatcgctgatcaagca
cgcacgatacgcatacctatccatatgatagaaacgataaaccgtatcaacaaaatcaac
cgaaaatacttacaagaagaaggcaaagagcctgatataaacgtaatcgcagccgaggtc
ggactaagcgcggacaagataaaacaggtcatcaaaataaccaaagagcctatcagccta
gaagctcctatcggcaacgaagacgacggtaaatttggagattttgtcgaggatagaagc
tcgctaagcccgatggatcacatcctaaaaaacgatctaaaagagcagatcgacgaagtc
ctggatcagctaaacgagcgcgaaaaagccgtcatcaggatgagatttggccttttagat
gacgagagcgaccgcacgctagaagagatcggcaaagagctaaacgtaacacgcgagcgc
gtccgccagatcgaaagctctgcgatcaaaaaactaaagcacccaaaagtcggtagaaaa
ctcaaaaactacatcgagggctaa
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