Campylobacter showae: CSHOW_0973
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Entry
CSHOW_0973 CDS
T07015
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csho
Campylobacter showae
Pathway
csho03420
Nucleotide excision repair
csho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSHOW_0973 (rep)
03430 Mismatch repair
CSHOW_0973 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csho03400
]
CSHOW_0973 (rep)
Enzymes [BR:
csho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSHOW_0973 (rep)
DNA repair and recombination proteins [BR:
csho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSHOW_0973 (rep)
MMR (mismatch excision repair)
Other MMR factors
CSHOW_0973 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCD48911
LinkDB
All DBs
Position
complement(1003273..1005306)
Genome browser
AA seq
677 aa
AA seq
DB search
MPLSKLNQEQYAAATAPAGHNLVIASAGTGKTSTIVARIAHLLNLGVKPEKILLLTFTNK
AAAEMIERLNRHFDKKITSRITAGTFHSVSYSLLKFLEKPVTLKQPSELKTLLKSLVERR
KFNHLSDVKPYGGAYLYDAYSLFQNLALKQTFGEWLKERSDEQGVYAEIYEDVLREFEEE
KSKFGYADFNDLLIKMRNELRKGAPLKFEEILVDEYQDTNSLQGSLISAFETKSLFCVGD
FDQSIYAFNGANIKIIGSFKDRFADAKIYALNINYRSSSAILALANKVIANNPRLYEKKL
VVGREGKFTSPKLLVYNELFDQYSNIAQVIAVSKYKKENIAIIFRNNSSADGLEVALREL
GIGSKRKGGVSFFESREVRAAMDLLGILINPKDIMAFIHVCEYAKGVGAALSKEIFEVLS
KVGHGDVVRGFLQPDDSVEAFAKKTKNYQLGLFDELDEVGEKSRFAKFNFSEKFFAHPIL
KMQKLSESGGQFLYEIYNFLNAAKRHSRPTSLIEDLKNSKIYALIADNLATKRATQKNGN
VDETLKKEALERIAGKLEVLGELAKNYSEAEKFYNFITLGSSEMSSGEGVNLLSVHASKG
LEFDLVFVVDLAQNRFPNLKLMSMGGSLEEERRLFYVAVTRARDELILSYAKYDKIKKIN
YQPSQFLIEAGMASAGI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttcaaaactaaatcaagaacaatacgccgccgcgacagcccccgccggacac
aatctagttatcgcctcggctggcaccggtaaaactagcaccatcgtcgcacgcatcgct
catctgctaaatttaggcgtaaagcccgagaaaattttactactaaccttcaccaacaag
gccgcggccgaaatgatcgagcgcctaaataggcattttgataaaaaaatcacctcgcgt
atcacggcgggcacctttcactcggtttcttattcgctgcttaaatttctagaaaaaccg
gttacgctaaagcagccaagcgagctaaaaacgctactaaaatcgctcgtagaaaggcgc
aaatttaaccatctaagcgacgttaaaccatacggcggcgcctatctttacgacgcgtat
tcgctgtttcaaaatttagccctaaagcagacttttggcgagtggctaaaggagcgaagt
gacgaacaaggcgtttacgccgagatttacgaggacgttttgcgcgaatttgaagaggaa
aagagcaaattcggctacgcggattttaacgacttgcttatcaaaatgcgcaacgaacta
agaaaaggcgcaccgctaaaatttgaggaaattttagtcgacgagtatcaggacacaaac
tcgttgcaaggctcgctaatcagcgcttttgagacgaaaagccttttttgcgtcggggat
tttgaccagagcatttatgcttttaacggcgcaaacatcaagatcatcggctcgtttaag
gaccgattcgcagacgccaaaatctacgcgctaaacatcaactaccgtagtagctctgcg
atcctagctctagccaacaaagtcatcgcaaacaacccgcgcctttacgaaaaaaagcta
gtcgtcggccgcgagggtaaatttacctcgccaaagctgctggtttataacgagcttttt
gaccaatactcaaacatcgcgcaggttatcgccgtcagcaaatacaaaaaagaaaacatc
gctatcatctttcgcaacaactcgagcgccgacggcctagaagtcgcgctgcgggagcta
ggcatcggctccaagcgcaagggcggagtgagcttttttgagagccgcgaggtgcgcgcc
gcgatggatctgcttggcatcctcatcaacccaaaagacatcatggcctttatccacgtg
tgcgaatacgcaaaaggcgtcggtgcggcgcttagcaaggagattttcgaggtactaagc
aaggtcggacacggcgacgtcgtgcgcggatttttacaacctgacgatagtgtggaggcc
tttgctaaaaagaccaaaaactaccagctggggctttttgacgagcttgacgaggtcggg
gagaagtcgcgctttgctaaatttaactttagcgagaaatttttcgcgcatccgatttta
aaaatgcaaaaactaagcgagagtggcgggcagtttttgtatgaaatttataatttttta
aacgccgccaaacgccactcgcgcccgacctctttgatagaggatcttaaaaacagcaaa
atttacgccctcatcgccgacaatctcgcaaccaagcgcgccacgcaaaaaaacggcaac
gtcgacgaaacgctaaaaaaagaggctctagagcggattgccggcaagctggaggtgctg
ggcgaactagccaaaaactactcggaggcggagaaattttataactttatcactttgggc
agcagcgagatgagcagcggcgaaggggtaaatctgctaagcgtgcacgcctcaaagggg
cttgagtttgacctcgttttcgtagtcgatctcgcacaaaatcgcttcccgaacctcaaa
ctcatgagcatgggcggctcgctcgaggaggagcggcggctcttttacgtcgcggtcact
cgcgcgcgcgacgagctgattttaagctacgctaaatacgacaaaatcaaaaagataaac
taccagcccagccagtttttgatcgaggccgggatggctagcgccgggatttaa
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