Campylobacter showae: CSHOW_1274
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Entry
CSHOW_1274 CDS
T07015
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csho
Campylobacter showae
Pathway
csho03030
DNA replication
csho03430
Mismatch repair
csho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSHOW_1274 (dnaQ)
03430 Mismatch repair
CSHOW_1274 (dnaQ)
03440 Homologous recombination
CSHOW_1274 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csho03032
]
CSHOW_1274 (dnaQ)
03400 DNA repair and recombination proteins [BR:
csho03400
]
CSHOW_1274 (dnaQ)
Enzymes [BR:
csho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSHOW_1274 (dnaQ)
DNA replication proteins [BR:
csho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSHOW_1274 (dnaQ)
DNA repair and recombination proteins [BR:
csho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSHOW_1274 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
TMP_N
Avidin
Motif
Other DBs
NCBI-ProteinID:
QCD49198
LinkDB
All DBs
Position
1306136..1307071
Genome browser
AA seq
311 aa
AA seq
DB search
MNQDFEALLAVIAKRNIAYADFVAATKQMDEYSELFDVRDVQMWRALGLDITRTAKNQIE
LKTRRNEIKDQIFCVVDIETSGGINSGQIIEIGALKLQNGEIIGKFETFVYAPYVPENIS
ELTGITAEHLKNAPSLAFVMEQFKVFLGQSVFVAHNVRFDYGFISATLEALGYGELLNRK
LCTIDLARRTIASPKYGLGTLKEILGIDNTHHRALSDAIAAAEIFKYSLQKLPSEVRTTE
DLIEFSKSAKTMKRLKTTTNEAGESVKFDDAVQADKFDDNKNLSAANVARNLNIGSKTQK
VKEPKLPIFDE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaagatttcgaagccctactcgccgtcatcgccaaacgaaacatagcctacgcg
gactttgtcgccgcgaccaagcaaatggacgaatactccgagcttttcgacgttcgcgac
gtgcagatgtggcgcgcacttgggcttgacataacccgcaccgcaaaaaaccaaatcgag
ctaaaaacgcggcgcaatgagataaaagatcaaattttttgcgtcgtggatatagaaact
agcggcggtataaatagcggccagatcatcgaaatcggcgcgctaaagctacaaaacggc
gaaataatcggcaaatttgaaaccttcgtgtacgcgccatacgttcctgaaaatatcagc
gagctaacgggaatcacagcagagcacctaaaaaacgcacctagcctagccttcgtcatg
gagcagtttaaggtttttctaggccagagcgtttttgtggcacacaacgttcgtttcgac
tacggatttatcagcgcgacattagaagcgctaggatacggcgagctactaaaccgtaag
ctctgcaccatagacctagcccgccgcaccatagcctcgccaaaatacggcttaggcaca
ctaaaagaaattttaggcatcgacaatacccatcatagagccctaagcgacgctatcgcg
gctgctgaaatctttaaatactcactgcaaaaactcccaagcgaagtaagaacgactgag
gatctgatagagtttagcaaatcagccaagacgatgaaacgactcaagaccacgacgaat
gaagctggcgagtcagtcaaatttgacgacgctgtgcaggctgataaatttgacgataat
aaaaatttgagcgccgcgaatgttgcgcgaaatttaaacatcggcagtaaaacacaaaaa
gtaaaagagcctaaactcccaatatttgatgagtaa
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