Campylobacter showae: CSHOW_1300
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Entry
CSHOW_1300 CDS
T07015
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csho
Campylobacter showae
Pathway
csho03420
Nucleotide excision repair
csho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSHOW_1300
03430 Mismatch repair
CSHOW_1300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csho03400
]
CSHOW_1300
Enzymes [BR:
csho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSHOW_1300
DNA repair and recombination proteins [BR:
csho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSHOW_1300
MMR (mismatch excision repair)
Other MMR factors
CSHOW_1300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
ADDB_N
CarD_TRCF_RID
AAA_11
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QCD49224
LinkDB
All DBs
Position
1336556..1338640
Genome browser
AA seq
694 aa
AA seq
DB search
MPDLLDELNESQREAASHTDGAMLILAGAGSGKTKTITTRLAYLISELGIPPSNTLTLTF
TNKAASEMRARALKMLGDAGKNFTPLLCTFHKFGLLFLKFYIDRLKRKNNFVIIDTDDKK
RILKGFEGDIPTSVLASEISNFKNSLLSVEEVLNHGGMFANGHNFKDGYHAKLANIYKLY
EEYLAANNLVDFDDLLCLSYKILDEDEALAREISRRYAYVMVDEYQDTNDLQYRLLRKLC
LTHENIAVVGDDDQSIYGWRGAKIENILNFKDQFKDAKVIRLEQNYRSTSQILRAANELI
DHNRNRLGKELKSTKEGGEDVALMESDDETMESLKVAKRIKKLLDSGAQASDIAILYRIN
ALSRSLEEGLTKEKIPYKMVGGVKFYERAEVKDVISYLRLVANENDDFSLKRVINRPKRG
LGKVSLAKIEKIAFEHKFSLFEAISSLDENDKDLSKKIVSSLGEFAANLRELKECDSPYE
LVDKLEAKFGIKKYYESLPDGSERVANIDEFYATIKDQIRQNPSFSIEEFLNEIALQSEQ
DNIGGEAISIMSIHASKGLEFEHLFVIGLEEGFFPLLGDGSDIEEERRLAYVAITRAKKT
LTLSFVNSRFYKGQRTRLEKSRFLSEAGVCSGSLIIQTQTQTAGEYKKGDLVKHKIFGIG
RVTAVTKIKKELKLTINFGGISREIMSSFVEKAV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttactagacgaactcaacgaaagccagcgcgaggcggcctcgcataccgat
ggagcgatgctgattttagccggggccggcagcggaaaaaccaaaaccatcactactcgc
ctagcctatctcataagcgagctaggcatcccgccgtcaaataccctaacgctaaccttc
accaacaaagccgcaagcgaaatgcgagcccgcgcgctaaaaatgctgggcgacgcaggt
aaaaattttactccgctgctttgcacttttcacaaattcgggcttttgtttttgaaattt
tacatcgaccgactaaagcgcaaaaacaacttcgtcatcatcgataccgacgataaaaag
cgtatcttaaaaggctttgagggcgacatcccgacctcggtgctagctagcgagatctca
aatttcaaaaactcgcttttaagcgtagaagaggtgctaaatcacggcggtatgtttgca
aacgggcataattttaaagacggctaccacgcaaagctagcaaacatctacaagctttac
gaggagtatctggcggcaaataacctcgtggattttgacgacctgctctgccttagctat
aaaattttagacgaggacgaggctctagcgcgcgagatctcgcgcaggtatgcctacgtg
atggtggacgagtatcaagacaccaacgaccttcagtacagactcctgcgcaaactctgc
ctaacgcacgaaaatatcgcggtcgtgggcgacgacgaccagagtatctacggctggcgc
ggcgcgaaaatcgaaaatatattaaattttaaagatcagtttaaagacgccaaagtcata
agactagagcaaaactaccgctcgacgagtcaaattttacgcgcggcaaacgaactcatc
gaccataacagaaaccgcctaggcaaggagctaaaaagcaccaaagaaggcggcgaggac
gtcgcgctgatggaatcagacgacgaaacgatggagagcctaaaggtagccaaacgcatc
aaaaagctgcttgatagcggcgcgcaggctagcgatatcgcgatcttgtaccgcataaac
gccctctctcgctcgctcgaagaaggcctaaccaaagaaaaaatcccgtataagatggtc
ggtggagttaaattctacgagcgcgccgaggtcaaagacgtcatcagctacctaaggctg
gtcgcaaacgagaacgacgacttctcgctaaagcgcgtcatcaaccgcccaaaacgcggc
cttggcaaggtaagcctcgcaaagatcgaaaagatcgccttcgagcataaattttcgcta
tttgaagcgatatctagcctggacgaaaacgacaaagatctaagcaaaaagatcgtctcg
agccttggcgaatttgcggcaaatttaagagagctaaaagagtgcgactcgccgtacgag
ctagtagataaactagaagcgaaattcggcatcaaaaaatactacgagagcttgcccgac
ggctccgagcgcgtggcgaacatcgacgagttttacgctacgatcaaggatcaaatcagg
caaaatccaagcttttctatcgaggagtttttaaacgagatcgcgctacaaagcgagcag
gataacatcggcggcgaggcgatctcgatcatgagtatccacgctagcaaggggcttgag
ttcgagcatcttttcgtgatcgggcttgaggagggatttttcccgcttcttggcgacggt
agcgacatcgaggaggagcggcgcctagcctacgtcgccatcacccgcgccaaaaaaacc
ctgacgctaagctttgtaaattcgcgtttttataaagggcagcgaacgaggctggaaaag
agcagatttttaagcgaagctggcgtttgcagcggtagcctcatcatccaaacgcaaacg
cagaccgcaggcgaatacaaaaagggcgatctcgtcaagcacaaaattttcggtatcggg
cgcgtgacggcggtaacgaagatcaaaaaagagctaaagctaacgataaatttcggcgga
attagccgcgagataatgtctagcttcgtcgaaaaagcggtatga
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