Campylobacter showae: CSHOW_1845
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Entry
CSHOW_1845 CDS
T07015
Name
(GenBank) putative surface layer protein
Organism
csho
Campylobacter showae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4214
Motif
Other DBs
NCBI-ProteinID:
QCD49742
LinkDB
All DBs
Position
complement(1885426..1889139)
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AA seq
1237 aa
AA seq
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MAVTQAQVAQLYVALFNRAPEGAGFNAWVAAGANKTQAQLAQLMLESPAALAYYGNTIDS
DRGYIETIYKNILGKDYTQDPNGIDSWVLHLQLGHSRGETLVKLFEVATSDIAKAADPVA
AKIFENKTAISAYMAEKIPNIQTDSSGNYDYGIFQEIIRTTTATNLDEQKAKIDALANAT
VHTLNNTTETLTGSAGVDIYSAVVSSFADKNTLGVEDKIDGGAGNDMLNVKIDDSFTGFT
TGYAKNIEGLNLVNTSNSQRVFNADKVEGLQSVSTHGANGVRVTNLSNIVDLTVIDQKDS
TEVGIAYNTDLVKGNNDAQNLILNNVGRVTPDTEADSHKNSLKVKFNGIETLNITTRENA
SYIKEVENKFITVKGEADLTISTKDKNPDAPFKDFVNSLDASALIGNLTADLTESAYYTS
IKSGNGNDTIKVGKLESNSVSIDMGAGNDTLQIEKVDALKQIKLKGVDNIEIFDKNDNVS
ALDLTGQTDVKSLKVGQLDQTLVVTSSSITTVNLTDKVDAKAASAGNGHGILHINDKFVD
TINYAIDNVTTPQDLIGKVRVSESKNLTVNLDKSVKTVNGELTDNAASVIEAPKATTINV
NVNMVENSGLALRNIHELKTINLTNNNPKKFTFDIHEDARVKTLNIATLGALDVLNNGLK
YISEINVKGLANMPVASLVELHNLGSIDSENGVKLNVNDLVTVYQGSSHVTALKVGDVTT
KKTTNAGANFNFKNVTNDIEVNKFDVGGEITFVANKIGNVKIADEIKSKNSGATFDISDS
RFNVEISSGNGIDVKNDVNFTAKDVTGKVSIANIKAENVNISLTNIKGQNETSAVGVGDI
NGNYVKNVNITLKDVLKDVKVGTLDLKSAAVIDGKIKVKESTSINIDAGNTKGIVDLGNT
GPVSADSVTVDLSKTIGANKFASIVADTVVYKGSTQTPLSTDVNITMKQDINSKDFVANI
TTSAQADKLVVTAATKFSLVNGSERVDGNDLKTATISGDMGTDATDEYTFDDTNAEKLTK
IDFSGLKNVEKGTITNTASKVIENIKATDGDDTITLAGDQKAAKISIDAGEGENTIKTGT
FLTPGHADADPKGQNITIKSGSGNDTFDVSASLIGAGFDSANESHTRLVTIDKINVGDKI
KFAGGTTAIEKVTLNANGNAQDNFALAAKLGGFFDGTNNQAGKIYAYSYLNDTYLVYNAA
AGDTDFGAGDTIVKLSGVNIANLNTTVNAGEVTINAF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaacacaagcacaagttgcacagctttacgtagcgttatttaatcgtgcccct
gaaggcgcgggctttaacgcatgggtggcggcgggagccaataaaacccaagctcagcta
gcccagctaatgctagagtcccctgcggctttggcatactatggaaatacgatagatagc
gatagaggctacatcgaaacaatatataaaaacatcctgggcaaagactatactcaagat
ccaaacggtatcgattcgtgggttttgcaccttcagctaggtcacagtagaggtgaaact
ctagttaaattatttgaagttgcaacttccgacatcgcaaaagcggcagatcctgtggcg
gctaagatttttgaaaacaagactgctatatctgcttacatggctgaaaaaataccaaac
attcaaaccgatagttcaggcaactatgattatggaatattccaagaaattattagaacg
actacggctacaaatttggatgaacagaaggccaaaatcgatgccttggcaaatgccacc
gtgcatacgctaaacaacacgactgaaacactaaccggaagtgcaggcgtggatatatat
agcgcggtcgttagctcatttgctgataaaaatacccttggcgttgaagacaagatagac
ggcggggccggcaatgatatgttgaatgttaaaatcgacgatagtttcactggctttaca
accggatatgctaaaaatattgagggactaaatttagtcaatacttcaaatagccaaaga
gtatttaatgcagataaggtagagggcttgcagtccgtgtctactcatggtgcaaacggc
gttagagtaacaaatctatctaatatagtcgatctaacggtaatagatcaaaaagattca
accgaagttggtatcgcctataacactgatctagtaaaaggcaataatgacgcgcaaaat
ttaatcctaaacaatgtgggcagagttactccggatacggaagccgacagccacaaaaac
tctcttaaggtcaaatttaacggtatcgagaccttaaacattacgactagagaaaacgct
agttatataaaagaggtggaaaataaatttatcacggtaaaaggcgaggcggatttaact
atatccaccaaagataaaaacccagacgctccatttaaagactttgtgaatagccttgat
gcatcagcgcttattggaaatttgacggctgatttaaccgagtctgcttactacactagc
atcaaaagcggcaacggcaatgacacgataaaagtaggaaaacttgagtccaactctgtt
tctatagacatgggcgctggcaatgatactcttcagatagaaaaagtggacgcattaaag
caaattaaattaaaaggcgttgataatatcgaaatctttgataaaaatgataacgtgagc
gctctagacttgactggacaaactgatgttaagagcctaaaagtgggccagcttgatcaa
acgttagttgttacaagttctagtataacgactgtaaatttaacagacaaagtggatgca
aaagcggccagtgcaggaaacggccacggtatactgcatataaacgacaaatttgttgac
actataaattatgcgatagataacgtgactacgcctcaagatttaatcggtaaagtaaga
gtttctgagtccaaaaatcttactgtaaatttagataaatcggttaaaactgtaaatggc
gaacttactgacaacgcagctagcgttatcgaggcgccaaaggctactacaatcaatgtg
aatgtaaatatggttgaaaattcaggccttgctctaagaaatattcacgagcttaagact
ataaatctaaccaacaataatcctaagaaatttactttcgatatccacgaggatgcgaga
gtgaaaacgctaaacatagctaccttgggtgctcttgacgttttaaataatggtctcaaa
tatatatctgagataaacgtaaaaggcctggctaatatgcctgtagcaagcctagtcgag
cttcacaatcttggctcgatagattctgaaaacggcgtaaaactaaacgtaaatgatctt
gttaccgtttatcaaggctcaagccacgtaacggctttaaaggtaggagacgtaactacg
aaaaagacgacaaatgccggtgcaaattttaactttaaaaatgtcacaaacgatatcgaa
gtaaataaatttgatgtaggcggcgagataactttcgtagctaataagatcggtaacgtc
aaaatagcagacgaaatcaagtctaagaatagtggcgctacatttgatattagtgattct
aggtttaatgtcgaaataagtagtggtaacggcatagacgttaaaaatgacgtaaacttt
acagctaaagacgtaacaggcaaagtatctatcgcgaatataaaagcagagaacgtaaat
atcagcttgactaatattaagggtcaaaacgagactagcgcggtcggggtaggagatata
aacggcaactacgtcaaaaacgtaaatattacgctaaaagacgtattaaaagacgttaaa
gtcggtactctagatctaaaaagcgctgccgttatagatggcaagataaaagtaaaagaa
agcacgagtataaacatcgacgctggaaacacaaagggcatcgttgatcttggcaacaca
ggacctgtaagtgctgatagtgtaacggtagacctcagtaaaactataggtgcaaataag
tttgccagtatcgtggcagatactgtagtctataagggctctactcaaactccactttca
acagatgttaacatcaccatgaagcaagatatcaattcaaaagatttcgttgccaatatt
actacgtctgctcaggctgataagttggttgtaactgctgctacaaaattctcgcttgtt
aatggttctgaaagagttgacggtaatgatctaaaaacagctactatctcgggcgatatg
ggtacagacgctaccgacgagtacacgtttgacgataccaatgctgaaaagctaacaaaa
attgactttagcggattaaaaaacgtagagaaaggcactataacaaataccgcaagtaaa
gttattgagaacattaaggctaccgacggagacgatactattactctagcgggcgatcaa
aaagctgcaaaaatttcaatcgatgcaggtgaaggcgagaataccattaagacaggaact
ttcctaaccccaggtcatgccgacgcagatccaaaaggtcaaaatataaccatcaaaagc
ggttcaggcaacgatacattcgatgttagtgcttcgcttataggcgcaggctttgatagc
gccaacgagtctcatactagacttgtaaccatagataagataaatgtaggcgataaaatc
aaatttgccggcggtaccactgctatagaaaaagtaactctaaatgccaacggaaacgcg
caagataacttcgctcttgcggctaaacttggcggattctttgatggcaccaataaccaa
gccggtaagatatatgcttattcatatctaaatgatacatacttggtatacaacgctgct
gcaggtgatactgactttggcgcaggcgacactatcgtcaaactatcgggcgtaaatatt
gccaaccttaacacaacagttaatgctggtgaagttactattaacgcattctga
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