Cronobacter malonaticus CMCC45402: P262_01154
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Entry
P262_01154 CDS
T02955
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
csi
Cronobacter malonaticus CMCC45402
Brite
KEGG Orthology (KO) [BR:
csi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csi03009
]
P262_01154
Enzymes [BR:
csi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
P262_01154
Ribosome biogenesis [BR:
csi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
P262_01154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PCMT
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
RrnaAD
MTS
Methyltransf_23
CMAS
Methyltransf_11
Methyltransf_15
FtsJ
PRY
Ubie_methyltran
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AHB69183
UniProt:
V5TVM0
LinkDB
All DBs
Position
855222..856538
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AA seq
438 aa
AA seq
DB search
MRNFLAMAQFYSAKRRVTTREIITVTADGLDAFGQGVARHHGKALFISGLLPGERAEVVL
SEDKKQFARGDVKKRLSQSPERETPRCPHFGVCGGCQQQHASVELQQRAKAQALSRMMKR
EVDEVISGPAWGYRRRARLSLNFPPRKPGLQMGFRKAGSNDLVDVHRCPVLVPRLEALLP
KLRDCLSSLDGVRHLGHVELVDVTSGPLMVLRHLKPLSAADREKLECFSHSEGVALYLAP
QSDTLEHLNGEMPWYESDGLRLTFSPRDFIQVNEAVNQQMVARALEWLDIQPGERLLDLF
CGMGNFTLPLARRAESVVGVEGVAALVEKGDYNARLNALKNVTFFQHNLEEDVTRQPWAQ
QGFDKVLLDPARAGAAGLMQHIVKLKPRRVVYVSCNPATLMRDSEALLAAGYRTERLAML
DMFPHTGHLESMALFERD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaatttcctggcgatggcgcaattctactctgcaaagcgacgcgtgacgacgcgt
gaaatcataaccgtgacggctgacggcctcgatgcctttggtcagggcgtggcgcgccat
catggcaaggcgttgttcatctccggtttattgccaggcgagcgcgcggaagtggtgctc
agcgaagataaaaaacagttcgcgcgcggcgacgttaaaaagcggctttcacaaagcccg
gagcgcgagacgccgcggtgtccgcattttggcgtatgcggcggctgccagcaacagcac
gccagcgtggaattacagcagcgcgctaaagcgcaggcgctgagccgcatgatgaagcgc
gaggtggatgaagtgatcagcgggcctgcgtggggctaccgccgccgcgcgcgtctgagc
ttgaatttcccgccgcgcaaaccaggcttacagatgggttttcgcaaggcgggttcgaac
gatctggtggatgtgcatcgctgccctgtgcttgtgccccgtcttgaagcgttgctgccg
aaacttcgcgactgcttaagcagccttgatggcgtgcgtcatcttggccatgtcgagctg
gtggatgtgacgagcggtccgttaatggtcttgcgccatctcaagccgttaagtgccgcc
gatcgcgaaaaactggaatgcttttcgcattccgaaggcgtggcgctgtaccttgcgccc
cagagcgatacccttgagcaccttaatggcgagatgccgtggtatgaatccgacggcctg
cggcttaccttcagcccgcgcgattttattcaggtcaacgaggctgtaaaccagcaaatg
gtggcccgcgcgctggagtggctggatattcagcccggcgagcgcttgctggatctcttc
tgcggcatgggcaactttacgctgccgctggcgcggcgcgcggaaagtgtggtgggcgtg
gagggcgttgcggcgctggtggagaaaggtgactataatgcccgccttaatgcgttgaaa
aacgtcacattctttcagcataacctggaagaagacgtcacccggcaaccgtgggcgcag
caggggttcgacaaagtgctgctcgatcccgcgcgtgcgggcgcggcgggcctgatgcag
catattgtgaaattaaaaccgcgtcgggtggtctatgtctcctgtaaccctgccacgctg
atgcgtgacagtgaggcgctgcttgcagcgggctatcgcaccgaacggctggcgatgctg
gatatgtttccacacaccggccatctggaatcgatggcgttgtttgaaagagattaa
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