Cronobacter malonaticus CMCC45402: P262_02404
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Entry
P262_02404 CDS
T02955
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
csi
Cronobacter malonaticus CMCC45402
Brite
KEGG Orthology (KO) [BR:
csi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csi03016
]
P262_02404
Enzymes [BR:
csi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
P262_02404
Transfer RNA biogenesis [BR:
csi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P262_02404
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DUF3253
Motif
Other DBs
NCBI-ProteinID:
AHB70072
UniProt:
V5TYT1
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All DBs
Position
1772238..1773359
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AA seq
373 aa
AA seq
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MNYQMITTNDALATLCETARTQRALALDTEFVRTRTYYPQLGLIQLYDGENVALIDPLTI
TDWAPFQALLQDQNVTKFLHAGSEDLEVFQNAFGMMPDPFIDTQVLASFVGHPLSCGFAT
LVEHHTGVVLDKSESRTDWLARPLTERQCDYAAADVWYLLPIAHKLMEQVREAGWLTAAI
NECRLMTQRRGEVLDPDEAWREITNAWQLRPRQLACLKLLAGWRLRKARERDMAVNFVVR
EENLWKVARHMPGSLGELDGMGLSGSEIRFHGKTLLALVAEAQALPEDALPEPLSNLVDM
PGYRKVFKEIKALVQETSEAHKISAELMASRRQINQLLNWHWKLKPQNQLPELISGWRGE
LLGDALKKLLQHY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgattaccaccaatgacgcgctggcgacgctgtgcgaaaccgcacgc
acgcagcgcgctctggcgctggacaccgaatttgtccgtacccgtacttactacccgcag
ctggggctcatccagctgtatgacggcgaaaacgtcgcgcttatcgatccgctgaccatc
accgactgggcgccgtttcaggcgctgttgcaggatcaaaacgtcaccaagtttctccac
gcgggcagcgaagatctggaagtgttccagaacgcgttcggcatgatgcccgatccgttt
atcgacactcaggtgctggcctcgtttgtcggccatccgctctcctgcggtttcgcgacg
ctggtagagcatcacaccggcgtggtgctggataaaagcgagtcgcgcaccgactggctg
gcgcgtccgctaaccgagcgccagtgcgattacgcggcggcggatgtctggtatctgctg
cctatagcccacaaactgatggaacaggtgcgtgaagccggctggctgaccgccgccatt
aacgaatgccgcctgatgacccagcgccgcggcgaggtgctcgatcctgacgaggcgtgg
cgtgaaatcactaacgcctggcagttgcgcccacgtcagctcgcgtgcctgaagctgctg
gccggctggcgtctgcgtaaagcgcgcgagcgcgatatggcggtaaatttcgtggtgcgc
gaagaaaacctctggaaggtggcgcgccatatgcctggctcgcttggtgagcttgacggc
atggggctttccggcagcgaaatccgcttccacggcaagacgctgctggcgctggtcgcc
gaggcgcaggcgctgccggaagacgcgctgccggagccgctctcgaatctggtcgatatg
ccgggctatcgcaaggtgttcaaagagatcaaagcgctggtgcaggagacgagcgaggcg
cacaagatcagcgccgagctgatggcgtcgcgccgccagattaaccagttgctgaactgg
cactggaagctgaaaccgcagaatcagctaccggaattaatcagcggctggcgcggcgag
ttattaggcgatgcgttaaaaaagctactgcaacattattaa
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