Cronobacter malonaticus CMCC45402: P262_05291
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Entry
P262_05291 CDS
T02955
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
csi
Cronobacter malonaticus CMCC45402
Pathway
csi02020
Two-component system
csi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P262_05291
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P262_05291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csi03021
]
P262_05291
Transcription machinery [BR:
csi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P262_05291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6189
Motif
Other DBs
NCBI-ProteinID:
AHB72129
UniProt:
V5U5R3
LinkDB
All DBs
Position
3942862..3944259
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AA seq
465 aa
AA seq
DB search
MTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQETQDSEGLDTAEALE
QKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSLQDYLMWQVELTPFS
DTDRAIATAIVDAVDDTGYLTVTVQDILDGMGDSDGDIGLEEIEAVLKRVQRFDPVGVAA
RDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRVTRLKEDVLKEAVNL
IQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNADSIPRLKINQQYAAMSGSARN
ESDSQFIRSNLQEARWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQ
AVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAEN
PAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcagttgcagcaggccattcgcttgttgcaattgtccacgctggagcttcag
caggagctgcaacaggcgctggagagtaatcccctgcttgaacaaaccgacattcacgac
gaaattgccactcaggaaacgcaggacagcgaagggctggacaccgccgaagcgctggag
caaaaagagatgccggacgagctgccgcttgacgccagctgggacgaaatctacaccgcg
ggcacgccttcaggcaccggcaccgactatatcgacgacgaacttcctgtctaccagggc
gaaaccacccagagcctgcaggattacctgatgtggcaggtggagctgacgccgttttcc
gataccgatcgcgccattgccacagcgatcgtcgatgcggtggacgacactggctacctc
accgtgacggtgcaggatattctcgacggcatgggcgacagcgatggcgatatcggcctc
gaagagatcgaagccgtgcttaagcgcgttcagcgtttcgatccggttggcgtcgccgcc
cgggatctgcgcgactgcctgttgatccagctctcgcagtttagcgccgaaacgcctttt
cttgcgcaggcgcgccagatagtgagcgatcaccttgaccttctggccaaccatgatttc
cgcagcctgatgcgcgtcacgcgccttaaagaagatgtgctcaaagaagcggtcaatctg
atccagtcactcgatccgcgccccggccagtcgatccagaccggcgagccggaatatgtt
attcccgatgtcctggtgcgcaagcataacggccgctggacggtcgagcttaacgccgac
agtattccccggctcaaaatcaatcagcagtacgccgccatgtcgggcagcgcgcgtaat
gaatccgacagccagttcatccgcagcaatctccaggaagccagatggcttatcaaaagc
ctggagagccgtaacgacacgctgctgcgcgtcagccgctgtatcgtcgaacagcagcag
gcgttctttgaacagggcgaagagtatatgaagccgatggtgctggcggatatcgcgcag
gcggtcgagatgcacgaatccaccatctcgcgcgtcaccacgcaaaaatatctgcacagc
ccgcgcggcatctttgaattaaagtattttttctcaagccacgtgaacaccgagggcggc
ggcgaagcctcgtccacggccatccgcgcgctggtgaaaaagttgattgcagcggaaaac
cccgcgaaacccttaagcgacagcaagctaacgtctatgctgtcagaacaggggatcatg
gtggcccgccgtaccgttgcgaagtatcgagaatctttatccataccgccgtcaaaccag
cgcaaacagctggtctga
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