Cronobacter malonaticus CMCC45402: P262_05456
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Entry
P262_05456 CDS
T02955
Name
(GenBank) recQ protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csi
Cronobacter malonaticus CMCC45402
Pathway
csi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P262_05456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csi03019
]
P262_05456
03400 DNA repair and recombination proteins [BR:
csi03400
]
P262_05456
Enzymes [BR:
csi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P262_05456
Messenger RNA biogenesis [BR:
csi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P262_05456
DNA repair and recombination proteins [BR:
csi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P262_05456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
DUF6972
Motif
Other DBs
NCBI-ProteinID:
AHB72247
UniProt:
V5U528
LinkDB
All DBs
Position
complement(4086990..4088882)
Genome browser
AA seq
630 aa
AA seq
DB search
MQFPTQALKIAPVLFSVSGVSVAQAEVYSQETLAKQVLQETFGYQQFRPGQATIIDAVLE
GRDCLVVMPTGGGKSLCYQIPALVKTGLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQ
SRDEQQAVMAGCRTGQVRLLYIAPERLMMDNFIDTLGYWDLAMVAVDEAHCISQWGHDFR
PEYAALGQLRARFPAVPFMALTATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLME
KFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQ
EKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLF
YDPADMAWLRRCLEEKAPGPLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGN
CDICLDPPRRYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYG
IGRDQSQEHWVSVIRQLIHLGVVTQNIAQHSALQLTEAARPFLRGEAPLMLAVPRVAALK
PRVAQKSYGGNYDRKLFAKLRKLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLG
INGVGTRKLERFGRPFMTLIREHVDGDDEE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
ttgcagtttccgacgcaggcgctgaaaatagcgcctgttttattttcagtatctggagtg
agtgtggcgcaggcggaagtttacagtcaggaaacgctggctaaacaggttttacaggaa
acctttggctatcagcagttccgtccaggccaggccaccattatcgacgcggtgcttgaa
gggcgcgactgcctggtggtgatgcccaccggcggcggcaaatcgctgtgttatcaaatc
ccggcgctggtgaaaaccggcctgaccatcgtggtttctccgctgatttctctgatgaaa
gaccaggtcgatcagcttctggcaaacggcgtggccgcggcgtgtctcaattcgacgcag
agccgtgacgagcagcaggcggtgatggcgggctgtcgtaccggccaggtgcgcctgctc
tacatcgcgccggaaagactgatgatggataacttcatcgacaccctgggctactgggat
ctggcgatggtggcggtagatgaagcgcactgtatctcccagtggggccacgatttccgc
ccggaatacgcggcgctcggccagctgcgcgcgcgtttcccggcggtgccgtttatggcg
ctcaccgcgacggcggatgacaccacgcggcgcgatatcgtgcgtctgctgggtcttgac
gatccgctgattgaaatcagcagttttgaccgcccgaacatccgctacatgctgatggaa
aaattcaaaccgctcgatcagctgatgcgctatgtgcaggagcagcgcggcaaatccggc
attatctactgcaacagccgcgcgaaagtggaagataccgccgcgcgtctgcaaagccgc
ggaatcagcgccgccgcctaccacgcgggcctcgaacatgaggtgcgcgcctcggtgcag
gagaaattccagcgcgacgatttacagattgtggtggcgaccgtggcgttcggtatgggc
atcaacaaacccaacgtgcgcttcgtcgtgcacttcgatattccccgcaatattgaatcc
tactatcaggagacgggccgcgccgggcgcgacggcctgcctgccgaggcgatgctgttt
tacgacccggcggatatggcgtggctgcgccgctgcctggaagaaaaagcgccaggcccg
ctgcaggatatcgagcgtcacaagctgaacgcgatgggcgcgttcgccgaggcgcaaacc
tgccgccgtctggtgctgctgaactatttcggcgaagggcgtcaggcgccgtgcggcaac
tgcgatatctgcctcgatccgccgcgccgctacgatggcctggtggacgcacaaaaggcg
ctgtcggctatcgcgcgcgtggagcagcgcttcgggatgggctatgtggtggaagtgctg
cgcggcgcgaacaaccagcgcatccgcgagctgggccatgacaagctcaaggtgtacggc
atcgggcgcgatcagagccaggagcactgggtcagcgttatccgtcagcttattcatctg
ggtgtcgtgacgcagaacatcgcgcagcactcggcgttacagctgaccgaagccgcgcgc
ccgttcctgcgtggcgaagcgccgctgatgctggcggtgccgcgcgtcgcggcgctcaaa
ccgcgcgtggcgcaaaaatcgtacggcggcaattacgaccgcaagctgtttgcgaaactg
cgcaaactgcgcaaagccatcgccgacgaagagaacatcccgccgtatgtcgtctttaac
gacgcgacgctgattgaaatggccgagcaaatgccgcttagccccggcgaaatgctcggc
attaacggtgtcggcacccgtaaactggagcgcttcggcagaccgtttatgacgctcatc
cgcgagcacgttgacggcgacgacgaagagtag
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