Corynebacterium silvaticum: CBE74_02080
Help
Entry
CBE74_02080 CDS
T07501
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csil
Corynebacterium silvaticum
Pathway
csil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBE74_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csil03021
]
CBE74_02080
03400 DNA repair and recombination proteins [BR:
csil03400
]
CBE74_02080
Enzymes [BR:
csil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBE74_02080
Transcription machinery [BR:
csil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBE74_02080
DNA repair and recombination proteins [BR:
csil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBE74_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ARU45484
UniProt:
A0A7Y4LK77
LinkDB
All DBs
Position
418283..422293
Genome browser
AA seq
1336 aa
AA seq
DB search
MIDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITGVDEEARHSDQTTLEAEMLLEKKDVEADAESEIAERAQKLEED
LAELEAAGAKADARNKVQKAADKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKTEDEIGGQ
GAYQAATETGPATGVYSSYAEALMARDRGVLGLQAKIQVRISHLRPPADVEAEQFPEGWE
QGQTWLADTTLGRIMFNELLPWNYPYLEGVMVRKGGGSNKILLGDVINDLAATYPMITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKEEILDRYEAEAAKIERKYWEQGALTERE
RYDRLVELWKEATDEVGNAVEKLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTKQGIRVPLAVEVKDAQGNVTGYTGHSLIETSVAVRVASVDVKDSEGNVLVPAGENL
TDQLIEKLIAAGVAEVKVRSVLTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTL
TINPDDGSDVVVYEKLSKRQGLATVRVPMESNPGAMIERTLSEGDHVNVGDRLLRGPADP
HDVLEVLGRRGVEQHLVDEVQDVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPG
TLVDLSEAKAANAEAIAAGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAI
NKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGY
GEFTGASVPLDEAYDL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgtcaacttcttcgacgagctccgcatcggcctggctaccgccgacgacatt
cgtcgttggtccaaaggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
ccggagaaggacggcctcttctgcgagcgaattttcggtccaacccgcgactgggagtgt
gcttgtggtaagtacaagcgtgtccgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtgaccaagtccaaggttcgtcgtgagcgcatgggccacatcgagttggctgcgccc
gtgacccacatctggtacttcaagggcgttccgtctcgcctcggctaccttttggacctg
gctccaaaggaccttgagcgcatcatctactttgctgccaacatcatcactggtgttgac
gaggaagctcgccacagcgatcagaccactcttgaggcagaaatgcttttggagaagaag
gacgttgaggctgacgctgagtctgagatcgcagagcgcgctcagaagctagaggaagac
ctcgctgagcttgaagcagcaggtgcaaaggccgatgctcgcaacaaggtgcaaaaggct
gcagacaaagagatgcagcacatccgcgagcgtgctgagcgtgagatcgaccgtcttgag
gagatctggcagacctttatcaagcttgctcctaagcagatgatcatcgatgagaccatc
tatgaagagcttgttgatcgctacgaggattacttcaccggtggcatgggcgcggaggct
atccaaacccttatccgcaactttgacctcgacgctgaggcagaagagctgcgcgagatc
atcaacaacggcaaaggccagaagaagatgcgcgctctcaagcgcctcaaggtcgttgct
gcattccagcgctcgggcaatgacccagctggcatggtgctcgactgcatcccggtgatc
ccgccggagctgcgtccgatggttcagctcgatggtggccgctttgctacctccgacctg
aacgatctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatctt
ggtgctcctgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcg
ctattcgacaacggccgtcgtggccgccctgtcactggtccgggcaaccgtccgctgaag
tccctgagcgatctgctcaagggtaagcagggtcgtttccgtcagaacctgctgggtaag
cgtgtcgactattctggtcgttccgttattatcgttggcccgcagctgaagctgcacgag
tgtggtcttcctaagctcatggctcttgagctcttcaagccgtttgttatgaagcgcctt
gtggaaaacgattacgcgcagaacatcaagtcggctaagcgcatggttgagcgtcagcgc
cctgaggtgtgggacgttctggaagaagcaatttctgagcaccctgtgatgcttaaccgt
gcacctaccctgcaccgcctaggtatccaggccttcgagcctaagctcgtcgagggtaaa
gccatccagctgcacccgcttgcctgtgaagccttcaacgccgacttcgacggtgaccag
atggctgtgcacttgccgctgtctgctgaggcacaagctgaggcccgcatcctcatgctt
gcctctaacaacattctctccccggcatccggtaagccacttgccatgccgcgtctggac
atggtgaccggtctttactacctcaccatggacaagactgaggacgagatcggtggccag
ggtgcataccaggctgctaccgaaaccggaccagcaaccggtgtgtactcctcctacgcc
gaggctcttatggctcgggaccgtggagttcttggcctgcaggctaagattcaggtgcgc
atcagccacctgcgtccgccggcagacgtcgaggcagaacagttcccagagggttgggag
cagggtcagacctggttggctgataccacccttggtcgcatcatgttcaacgagcttttg
ccgtggaactacccataccttgagggcgttatggtccgtaagggtggcgggtcgaacaag
attctcttgggcgacgtgattaatgacctcgctgcgacctatccgatgattactgtcgct
cagacgatggacaagatgaaggatgccggcttctactgggcaacccgaagcggcgtgacc
atcaccatgtctgacgtgctcgttcttcctaacaaggaagagatcctcgaccgctatgag
gccgaggctgcaaagatcgagcggaagtactgggagcagggcgctctgaccgagcgcgag
cgctacgaccgtctggttgagctctggaaggaggctaccgacgaggttggtaacgccgtc
gagaagctctacccggacgacaacccgattcctatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactcaaagggt
gactacatcacccgaccgatcaagacgtccttccgtgaaggcctgtcggttcttgagtac
ttcaacaactctcacggttcgcgtaagggccttgccgataccgctctgcgtaccgccgac
tcgggttacctcacccgtcgtctggtggacgtcgcgcaggacgttatcgtccgcgaggat
gactgtggcaccaagcagggcattcgtgtcccattggctgtcgaggttaaggatgctcag
ggcaacgtcaccggttacaccggacacagcctcatcgagacttctgtcgctgtccgtgtg
gcttccgtcgacgtcaaggattctgaaggcaacgtcttggtgcctgctggtgaaaacctc
accgatcagctcatcgagaagctcatcgctgcaggtgttgctgaggtcaaggttcgctcc
gtgcttacctgccagaccccgaccggcgtgtgtgctaagtgctacggcaagtccatggct
accggcaagctcgttgacatcggagaggcagtgggtattgtcgctgctcagtccattggt
gagcctggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggcgacatt
accggtggtcttcctcgtgttcaggagctcttcgaggctcgtgttcctaagaaccgtgct
ccgattgcttctgtcgcaggtaccgtccaccttgaggatgaaggcaacttctacaccctc
accatcaacccagatgatgggtctgatgttgtggtctacgagaagctttctaagcgtcag
ggtctggctaccgttcgggttcctatggagtccaacccgggtgccatgatcgagcgcacc
ttgtcagagggcgaccacgtgaacgtgggcgatcgtctgctgcgtggtcctgctgatccg
cacgacgtacttgaggttcttggtcgtcgtggtgttgagcagcacctcgttgacgaggtt
caggacgtttaccgtgcacagggtgtggctatccacgataagcacatcgagatcatcatc
cgccagatgctgcgtcgcggaaccgtcatcgagtccggatcgactgagttcctcccaggc
actctcgttgatctctcggaggctaaggctgctaacgccgaggctattgccgctggtggt
cagcccgctgagctccgctcggagatcatgggtattaccaaggcatcgctggctaccgag
tcgtggctgtccgccgcgtccttccaggagaccacacgcgtgcttaccgacgccgccatc
aacaagcggtccgataagctgatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggccggtaccggtatttcccgttaccgcaacatctccgttaagccgactgaggcagct
cgcaatgcggcttactcaatcccgacttatggagactccatctatggcgatgacggctac
ggtgagtttaccggcgcttctgtgccactggatgaggcctacgacctctaa
DBGET
integrated database retrieval system
