Corynebacterium silvaticum: CBE74_07400
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Entry
CBE74_07400 CDS
T07501
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csil
Corynebacterium silvaticum
Pathway
csil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBE74_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csil03019
]
CBE74_07400
03016 Transfer RNA biogenesis [BR:
csil03016
]
CBE74_07400
Enzymes [BR:
csil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CBE74_07400
Messenger RNA biogenesis [BR:
csil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBE74_07400
Transfer RNA biogenesis [BR:
csil03016
]
Prokaryotic type
tRNA degradation factors
CBE74_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ARU46342
UniProt:
A0A7Y4LI96
LinkDB
All DBs
Position
complement(1559109..1561412)
Genome browser
AA seq
767 aa
AA seq
DB search
MTVVRRNIHEETCTLSKAKNIEFNVDEEFGITEAIATIDNGDFGTRTIRFETGQLAKQAD
GSVTTYLDDETMLLATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTE
AILACRLIDRPLRPTFVKGLRNEVQVVITVLSINPEDYYDVVAINGASAATQLSGLPVSG
AVGGVRMALIADEAHPKGQWIAFPTHEQHEKALFELVVAGRLVAKKQGRKTVEDVAIMMV
EAGATENVVEKIKGGAPAPTEEIVAQGLEAAKPFIEVLCRAQAGLAERTAKETQEFPLFP
PYSDVIYDAVEKKVSKKLRQLLTIKSKQERDDATNEYMESIEGELLAKFGSEDEAAASKA
IRAAYNAVMKKLVRHMILTEHFRIDGRGVTDIRDLGVEVELVPRAHGSALFERGETQILG
VTTLDMLKMEQQIDSLSPTSSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALM
PVIPSREEFPYTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKASVAGIAMGLVSDE
VDGETRYVALTDILGAEDAFGDMDFKVAGTRDFVTALQLDTKLDGIPSKVLASALAQAYE
AREAILDTMAEVIESPDEMSDYAPRITTVTVPLSKIGEVIGPKGKMINSITEETGANISI
EEDGTVYVSATSGAAAEAAIEKINAIANPQLPKAGERFLGTIVKTTAFGAFVSLVPGRDG
LIHISKLGNGKRIEKVEDVINVGDKVEVEILDIDNRGKISLAPVKED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgtgagaaggaatatccacgaggagacctgcactttgagcaaggcaaaaaac
atcgaattcaacgtagatgaagaattcggtattaccgaagcgatcgccaccattgacaac
ggcgacttcggaacccgtaccattcgctttgaaactggccagctggccaagcaagccgac
ggttctgtcaccacgtacctggatgatgagacgatgctgttggccaccacgacggcctct
aaccagccgcgtgaaggattcgacttcttcccactaacggtggacgtcgaggagcgcatg
tacgcagcgggccgcattccaggttcgtttttccgtcgcgagggacgtccctccactgag
gcaatcttggcttgccgcctgatcgaccgcccgctacgtccgacttttgttaagggactg
cgcaatgaggtccaggttgttatcaccgtcttgtccatcaacccagaagactactatgac
gttgttgcaatcaacggcgcatcagctgctacccagctttccggtcttccggtgtcgggt
gcggtaggcggagttcgcatggctcttatcgcggatgaagcacatcccaagggtcagtgg
attgcattcccgacccatgagcagcacgaaaaggctctttttgagctcgttgttgccgga
cgtcttgtcgctaagaagcagggtcgtaagactgtcgaagacgttgccatcatgatggtg
gaagcaggtgctactgagaacgttgtagaaaagatcaagggtggcgctcctgcgccgaca
gaagagatcgttgcacaaggcctagaggcagctaagcctttcatcgaggttttgtgccga
gcacaggctggcctggcagaacgcacagctaaggaaactcaagaattcccacttttccca
ccgtattcggacgttatttacgatgctgtggaaaagaaggtttctaagaaactgcgtcag
ctgttgaccattaagtcaaagcaagagcgtgacgacgccaccaacgagtacatggaatcg
atcgagggcgagttgctcgcaaaattcggttctgaggatgaagctgctgcatcgaaggct
attcgcgctgcttataacgcagtgatgaagaagcttgtgcgtcacatgattctcaccgag
cacttccgcattgatggccgtggtgtgactgacattcgcgatcttggagtagaggtagag
ctggttccacgtgcgcacggttccgctctattcgagcgcggtgagacacagatcttgggt
gtgaccacgctagacatgctcaagatggagcagcagattgattcgttgtcgcctacatcg
tctaagcgctacatccatcactacaacttcccgccgtactccaccggagaaactggccgt
gtgggttccccgaagcgtcgcgagatcggccatggagcgcttgccgagcgcgcccttatg
ccggtgatcccttcccgcgaggagttcccttacaccatccgtcaggtttcggaagccctc
ggatctaacggttctacctctatgggttcggtgtgtgcctcaacgctctcgctatacaac
gcgggtgttcctctgaaggcctcagtggctggtatcgctatgggcctggtgtctgatgaa
gttgacggagaaacccgttatgttgctttgacagatatccttggcgctgaggatgccttt
ggtgacatggacttcaaggttgctggaactcgtgactttgtgacggccctacagctggat
accaagcttgatggcattccttccaaggttctcgcgtctgcgcttgcacaggcttatgaa
gcccgcgaagcaattctggacaccatggctgaggtcattgagagcccagatgagatgagc
gactatgctccgcgcatcacgactgtcactgttccactcagcaagatcggtgaggttatc
gggcctaagggcaagatgatcaactcgatcaccgaggagaccggagcaaacatctccatt
gaggaagacggaactgtctatgtttccgcgacctccggagctgccgctgaagcagcgatc
gaaaagatcaatgctattgctaatccgcagttgcccaaggctggtgagcgattcctcgga
accatcgttaagaccaccgcttttggtgcatttgtttctctcgtacctggtcgtgacggc
ctcatccacatctctaagctcggcaacggtaagcgcatagagaaggtagaagacgtaatc
aacgttggtgacaaagtcgaggtggagatcctcgatatagacaaccgcggcaagatttcc
ttggcaccggtgaaggaagactag
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