Camellia sinensis (tea plant): 114255807 Help Entry 114255807         CDS       T07364                                  Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism csin  Camellia sinensis (tea plant) Pathway csin03013   Nucleocytoplasmic transport csin03040   Spliceosome Brite KEGG Orthology (KO) [BR:csin00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     114255807   09122 Translation    03013 Nucleocytoplasmic transport     114255807  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csin03019]     114255807    03041 Spliceosome [BR:csin03041]     114255807 Messenger RNA biogenesis [BR:csin03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      114255807 Spliceosome [BR:csin03041]  Complex C   Other components    EJC/TREX     114255807  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     114255807 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 TPR_MLP1_2 Motif Other DBs NCBI-GeneID:  114255807 NCBI-ProteinID:  XP_028051156 LinkDB All DBs Position Unknown AA seq 1892 aa AA seqDB search MSLPPLECICVTEESIREWKNGNPSFKAPNPVPVLRFLYELCWTVVRGELPFQKCKAALD SVDFLDKVSDEEMSSNFADVVTQMAQDLTMPGEYRARLIKLAKWLVESALVPLRLFQERC EEEFLWESEMIKIKAADLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQGSEAS TQNASAAIVGIIKSLIGHFDLDPNRVFDTVLECFELRPDSSVFLDLIPIFPKSHASQILG FKFQYYQRMEVNCPVPFGLYQLTALLVKKEFIDLDSIYAHLLPKDDEAFEHYNAFSAKRL DEANKIGKINLAAIGKDLMDDEKQGDVTIDLFAALDMESEAVTERASELENNQTLGLLTG FLSVNDWYHAHILFDRLSPLNPAEHVQICNELFRLIEKNISPAYDLVRQTHLQSLGLPSA AGNDSMETNSSVHKSFINLPKELFQMLSCAGPFLYRDTLLLQKVCRVLRSYYLSALELVS ADNGDFIPETGIGGNRNPRFHLKEARLRIEEALGTCLLPSLQLIPANPAVGQEIWEVMNL LPYEARYRLYGEWEKDDERIPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHAN PMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDVLEYVVIERLAQGGREKLKDDGLNL SDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGNGIELLLLQELIQQMANVQYTEN MTEEQLDAMAGSDTLRYQATSFGMTRNNKALIKSTNRLRDSLLPKDEPKLAIPLLLLIAQ HRSVVVINADVQYIKMVSEQFDRCHGTLLQYVEFLCSAVTPTTAYGQLIPPLDDLVHLYH LDAEVAFLIYRPVMRLFKCQTSSDVFWPLDNTEAPKTSIVENESELTDSSGKLVLDLGPS RKPITWSDLLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRNRYESEIVKQHAALK ALEELSDNSSSAITKRKKDKERIQESLDRLTSELQKHEENVASVRRRLACEKDKWLSSCP DTLKINMEFLQRCIFPRCTFSMPDAVYCSMFVHTLHSLGTPFFNTVNHIDVLICKTLQPM ICCCTEYEVGRLGRFLCETLKIAYHWKSDESIYERECGNMPGFAVYYRDPNSLRVTYSQF IKVHWKWSQRITRLLIQCLESAEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKS DEREDLKVLATGVAAALAARKPSWVTDDDFGMGFLELKPAPSLASKSLGGSSVQNVPQSE PTGGRVFATGTQHPDSGNAVKDQILRTKPVDGRLERTESASLKPDLGHVKLKGGSLLNGS DAQASMPSAAVHAGTSKSIENQKQMDESTNRILDENVPKVGSKTSSESQVRGPVKRPLPA GSLSKQPKQDLGKDDSKSGKSFGRISGPPSNSDRDLSHPVEGRQGVTANISSAGSANGNV LPTSTKGTTPSTKSLDIHGSEPKVESGAVKASDLRISAVKDDSAEVSDIQRAPSSRPVHS PRHDNSVTASKSVDKPQKRASPAEDLDRLNKRRKGEADSRDLEGEVRFSDRERSIDPRLA DKHFPVDVDKSGSDEQIISRATDKPLDRSKDKGTERHDRDYRERLDRSEKSRGDDIIMEK SRDRSMERYGRERSVERGQDRGSDRSFDRLADKAKDERIRDDRSKLRYNETSAEKSHVDD RFHGQNLPPPPPLPPHMVPQSVNAGRRDEDADRRFGTARHTQRLSPRHEDRERRRSEENT FVSQDDAKRRREEDFRDRKREEREVISVKVEEKEREREREKTNPLKEDMDANVSKRRKLK REHLPEAGEYSPAAPPPPPVNIGMSQPYDGRDRADRKGTMVQRPGYLEEPGLRIHGKEAT SKMTRRDTEPTYDRDWDDEKRQRAEPKRRHRK NT seq 5679 nt NT seq  +upstreamnt  +downstreamnt atgtctcttccgcctctggagtgtatttgcgttacagaagaaagtattcgggaatggaag aacggaaaccctagcttcaaggcccccaacccggtcccagtgcttcgttttctgtatgag ctttgttggaccgtggttcggggtgaattgccatttcagaagtgtaaagcggcattggat tcagttgactttttggataaagtctcagatgaagaaatgagttcaaattttgcagatgtt gtgacccaaatggctcaagatcttacgatgcctggagagtatcgcgctcgtctcattaaa ttggcaaaatggctggtggagtctgcattagttccattgaggctttttcaggagcgctgt gaggaagaatttttatgggaatctgaaatgatcaagataaaggctgcagatttgaagtct aaagaggtcagagtaaacactcgtttgctctatcagcaaactaaatttaaccttcttcgg gaagagagtgagggctatgccaagctggttacgcttctttgtcagggttctgaggcatca acccaaaatgcatcagcagcaattgttggcataattaagtcactgattggacactttgat ctggatccaaatcgcgtgtttgacactgtattggagtgttttgaacttcggcctgatagc agtgtattcttggatctgattcccatttttcccaagtctcatgcttcccagattcttggt tttaagtttcaatactatcagcgtatggaagtgaattgcccagtgccatttgggctctat cagttgacagctttactggtgaagaaagagttcattgatcttgatagcatatatgcacat ttacttcccaaggatgacgaggcatttgagcattataatgctttttctgctaagcgactt gatgaggctaataaaattggcaaaataaatcttgctgctattgggaaggatcttatggat gacgagaagcaaggagatgtgacaatagatctttttgctgctttagacatggaaagtgag gcagtcactgaacgggcttcagagcttgagaataatcaaactttgggcttgctaactgga tttctttcagtgaatgactggtatcatgcccatatactttttgatcgtctttctcctctt aacccggcggaacatgttcaaatttgtaatgaattgtttaggctcattgaaaaaaatata tctccagcatatgacctagttcggcaaacacatcttcagagcttggggttgccttcagca gctggtaatgattctatggaaacaaattcatcagtccataaatccttcattaatcttcca aaagagctttttcagatgctttcttgtgctggaccttttctttaccgtgatacattgctg ctgcagaaggtatgtagagtactgagaagctattacctgtctgcacttgagcttgttagt gccgataatggagattttattcctgaaactggtattggtggaaatcgaaatcctcgtttt cacctgaaggaagccagattaaggattgaggaagccctgggaacatgtctacttccttct ttacaattgatacctgcaaatccggcagtcgggcaggagatatgggaagttatgaatctc cttccatatgaggcgaggtatcgtttatatggtgaatgggaaaaagatgatgaacggatt ccaatggttttggctgctaggcaaacggcaaagttagacactagaagaatcttgaaacga cttgcaaaggaaaatctaaagcagctgggtcgaatggttgcaaaacttgctcatgccaat ccaatgaccgtacttcgaacaattgttcatcagatagaggcatacagggatatgattact cctgtggtagatgcattcaagtacttgacacagcttgagtatgatgttttggagtatgtt gtgattgagcgcttggcacaaggtggacgtgagaagctaaaagatgatggtcttaatttg tcagactggcttcaatctctggcttcattttggggtcacttgtgcaagaaatacccatca atggaacttagaggtcttttccaatatcttgtgaatcagttgaaaaaagggaatggaatc gaacttcttcttctgcaggagcttatccagcaaatggcaaatgtccaatatacagagaac atgactgaggaacagttagatgccatggcagggagtgacactctccggtatcaggctact tcttttgggatgacccgaaacaacaaggcattgatcaaatccactaacaggctgagggac tcattgcttccaaaggatgaaccgaagttagcaattccactactgttgcttattgcccaa catcgttctgtggttgtcataaatgcagatgtgcaatacattaagatggttagtgaacag tttgatagatgccacggaacccttcttcaatatgtagaattcctgtgtagtgctgtgaca ccaacaacagcatatggtcagctgattccacctcttgatgatcttgtacacctttaccac cttgatgccgaggtggctttcttaatttatcggcctgtaatgaggctcttcaagtgccag actagttctgatgtcttctggccgttggataacactgaagctccaaagacctcaattgtg gaaaatgaatctgaactcacagattcttctggcaaattggttctagatcttggtccttcc cggaagcctataacgtggtcagatcttcttgatacagttagaacgatgttaccttcaaaa gcgtggaacagcctttctccagatctgtatgccactttttgggggcttacactttatgat ctttatgttcctagaaatcgttatgagtctgaaattgtcaagcagcatgctgctcttaaa gctctcgaagaactatctgataattctagctcagcaataacaaaaaggaagaaagacaag gaaagaattcaagaatctttggatcgtcttactagtgaactccagaaacatgaagaaaat gttgcatctgttcgaaggcggcttgcttgtgagaaggataagtggttgagttcctgcccg gatactttgaagattaacatggagttcctccagcgttgtatttttccacgctgtactttc agtatgcctgatgctgtttattgttctatgttcgtacatactcttcattctctaggaaca ccatttttcaacacagtcaaccacattgatgttctgatatgtaaaaccttacaacctatg atatgctgctgtactgagtatgaagtgggtcgacttgggaggtttttatgtgagacgttg aagattgcttaccactggaagagtgatgaatcaatatatgaacgtgagtgtggaaacatg ccagggtttgctgtctattatagagatccaaacagccttcgtgttacttatagtcaattt attaaggtacactggaaatggagtcagcggattacaaggttgttgattcagtgtttggaa tctgctgagtacatggagatccgaaatgctcttataatgttgacaaaaatttctagtgtt ttccctgtcactcgaaagagtgggatcaaccttgaaaaacgggttgctaaaattaaaagc gatgaaagagaggatctcaaggtgttggctacaggcgttgctgcagccttggctgctaga aagccttcatgggtcacagatgatgattttggcatgggatttcttgaactgaaacctgcc ccttctcttgcttcaaaatcgctaggtggtagttctgtacaaaatgttcctcaaagtgaa cctactgggggaagagtttttgctacaggaactcaacatccagattctggaaatgctgtc aaagaccagatattgagaaccaaacctgttgatgggaggctggaaagaacagaaagtgct tcactgaaaccggatctgggacatgtaaaacttaaaggtggctcattattaaatgggtca gatgctcaggcctccatgccctctgctgctgtacatgcaggaacatccaaatcaatagaa aatcagaaacagatggatgagtctacaaaccgaatattggatgagaatgtccccaaagtt gggtcgaagacatcctcagaatctcaggtgagaggtcctgtaaaacgcccattgcctgct ggatctctttcaaaacaaccgaaacaggatcttggaaaagatgacagtaaatctggaaaa tcttttggcagaatatcaggtcctccttctaactctgacagagatctctcgcatccagtt gaaggcaggcaaggtgtgacagctaatatttcttctgcaggttcagcaaatggcaatgta cttccaacttcaactaaaggaactactccatccacaaaatcattagatatccatggcagt gaaccaaaggtagagagtggagctgtaaaggcttctgatttgcggatttctgctgtaaaa gatgatagcgctgaagtttctgatattcaaagagctccttcttcaagacctgttcattct cctaggcatgataactctgttacagcttcaaaatctgttgacaaaccacaaaagagagcc agccctgctgaagatttggaccgactaaataagcgtcggaaaggagaagctgattcaaga gatttagagggtgaagttcgattctctgatagggagaggtcaattgatccccgattagct gataaacattttccagtggatgttgacaaatcaggatctgatgagcaaattatcagtaga gctacagataagcccctggacaggtctaaagataaggggaccgaaagacatgacagggac tatagggaaaggttagaccgttctgaaaagtcccgtggagatgatattataatggaaaaa tcaagggataggtcaatggaaagatatgggagagagcgttctgtggaaagaggacaagac agaggttctgatagaagctttgataggctggctgacaaagctaaggatgaaaggatcaga gatgatagaagtaaattgcgctataatgaaacatcggcagagaaatctcatgttgatgat cgatttcatgggcaaaacttgcctccaccaccaccattacctcctcacatggtaccccag tcagttaatgcaggaagaagagatgaggatgctgacagaaggtttggaactgctagacat actcaaagactttcaccaaggcatgaagatagagaacggagacgatctgaggagaataca tttgtttcacaggatgatgcaaaacgcagaagagaagaggattttagagatagaaagcgg gaagagcgagaggtgatatcagtaaaggtggaggagaaagagagggaaagggagagggag aaaacaaaccctttgaaggaggatatggatgcaaatgtgtctaaaagacgaaaactcaaa agggagcatctgcccgaggctggtgagtattcacctgcagccccaccacctcctcctgta aatattggtatgtcacagccatatgatggaagagacagggctgacaggaaggggaccatg gttcagcgtccgggttacttggaggaaccgggcctgaggattcatggcaaagaagcaacc agcaagatgactcgtcgtgatactgaaccgacatatgacagagattgggatgatgagaag aggcagagagccgaaccaaagaggcggcaccggaagtga

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