KEGG   Camellia sinensis (tea plant): 114256006
Entry
114256006         CDS       T07364                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114256006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114256006
   03041 Spliceosome [BR:csin03041]
    114256006
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114256006
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114256006
Spliceosome [BR:csin03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114256006
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_11
Other DBs
NCBI-GeneID: 114256006
NCBI-ProteinID: XP_028051358
LinkDB
Position
Unknown
AA seq 397 aa
MDLTKKRKLDENGDFPANSDAGATQLSLEDARKIFEPFTHSQLLEIALNAVVSHPDVLSA
VRSIADRDPSQRKLFIRGLGWDTTTEKLRSLFSGYGDLEEAVVILDKATGKSKGYGFVTF
KHVDGALLALKEPSKKIDGRMTVTQLASAGVQGGPILNPNSASDVSARKIYVANVPYDMP
ADRLLAHFSAYGEIEEGPLGFDKATGKSKGFALFVYKTAEAANASLVDPIKTIDGRQLSC
KLAIEGKKGKPGMPTAPAPANGGGPGGSYGGFSGGIPGGPPMGHNPLNSSIGGGGGGYGS
GLGGSYGGSHYGGPGSTGYGGLGLGGSGGGLGGAGRGSSLYRLPQSSAGMPLSGYPEGGQ
YSLSSSGYPSQHHQTAGTSPVPRVPPGGMYQGGLPYY
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggacctaaccaagaagcgaaagctcgacgaaaatggcgattttccggcgaattccgat
gccggagcgacccaactttccctagaagacgctcgcaagatcttcgaacccttcactcat
tcccagctcctagagatcgccctaaacgccgtcgtttcacaccccgacgtcctctccgcc
gtccgatcaatcgccgatcgtgacccctcgcagcgaaagctcttcattcgcggcctcggt
tgggacaccacgacggagaagcttcgatctctcttctccggctatggcgatctcgaagag
gccgtggtgattctcgacaaagccacagggaagagtaaaggctatggatttgtgactttc
aagcacgttgatggggctttgttggctttgaaggagccgagtaagaaaatcgatggtcga
atgactgttactcagcttgcctctgcgggagtccaaggggggccgattttgaaccctaat
tcggcatcggatgtgtcggcgaggaagatttatgtggcgaatgtgccgtatgacatgccg
gcggatcgattgttggcgcatttttcagcctatggggagattgaagaagggcctttgggt
ttcgataaggcgactgggaagtcaaaagggtttgctttgtttgtgtacaagacagctgag
gctgccaatgcttcgcttgttgatccaattaagacgattgatggacgtcaattgagttgt
aaattggcaattgaagggaagaaagggaagccggggatgcccacagccccagcgcccgcc
aatggtggtggtcctggtggttcgtatggtgggttttccggtggaataccgggcggcccg
ccaatgggtcataatcctctgaattcatcaattggtggtggtggtggtggttatggttct
gggttgggtggttcttatggtggttctcactatggtgggcctggttcaactgggtatggt
ggattaggattgggtggcagtggtggcggtttgggcggtgccggtcgtggttcttcattg
tataggttgccacaaagctcagctgggatgcctttgagcggttatccggagggtgggcaa
tatagcttgtcatcatctggatatcctagccagcaccatcagacagcggggacatcaccg
gtgcctagagttccacctgggggaatgtaccaaggtggcctcccatactactga

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