Camellia sinensis (tea plant): 114256417
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Entry
114256417 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114256417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114256417
03036 Chromosome and associated proteins [BR:
csin03036
]
114256417
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114256417
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114256417
PBAF complex
114256417
GBAF(ncBAF) complex
114256417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
114256417
NCBI-ProteinID:
XP_028051869
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSMNNNNPPKNIGVPSPFGNAGVVSSNLPANPTAHLQSQSQGQQQFGSGFPSQFQLSQLS
AAQAQAFAQAQSKAQQAHAQAQAQAAHAQFQAQLQAQGLPLNQSHTSGIGNMGSSSPLVN
TPGNASAKRIPQKPPMRPPAFSATNTMSPLRNMELAAAARRKKQKLPEKQLQERVAAILP
ESALYTQLLEFESRVDAALARKKIDIQEAIKNPPSIQKTLRIYVFNTFANQIRTIPKKAN
AEPPTWSLKIVGRILEEGIDPDQAGMMQRSSSLYPKFSSFFKRVTISLDQRLYPENHIIM
WDSARSPQHQEGFEVKRKGDKEFTANIRLEMNYTPEKFKLSPALMEVLGIEVDTRPRIIA
AIWHYVKARKLQNPNDPSYFNCDPPLQKVFGEEKMKFTMVSQKISHHLSPPQPIHLDHKI
KLSGNSPAGNACYDVLVDVPFPIQKELNTLLANTEKTKEIDTCDEAICTAIRKIHEHRRR
RAFFLGFSQSPVEFINNLIESQSRDLKLVAGEASRSAEKDSDSSDFFNQPWVEDAVIRYL
NRKPVADGPGST
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaataacaataacccacccaagaatattggggttccgtccccctttggaaat
gccggggttgtttcttcaaatttgcccgcaaatccaaccgcacacctccaatcacagtcc
caaggtcaacaacaatttggttctggttttccaagtcaatttcagttgtcccagctatct
gcagctcaagcccaggcgtttgcccaagcgcagtcgaaggcccaacaagctcatgcccaa
gctcaagctcaagcagcacatgcccaattccaagctcagttacaagctcaagggttgccc
cttaatcagtcccacacttctgggattggtaacatgggttcctcttcaccattggtaaac
acaccaggcaatgcaagtgcgaaacgaatacctcagaagccaccgatgcgaccaccggcc
ttttcagctaccaacacaatgtcacccttgagaaatatggagcttgcagctgctgctcgt
agaaagaagcagaagcttcctgagaagcagttgcaggagagagtggcagcaattttgcct
gaatctgctctttacacccagctccttgagtttgaatctcgtgtagatgctgctttggca
agaaagaaaattgacatccaggaggccattaaaaaccctccctccattcagaaaacgctt
cgaatctatgtgttcaacactttcgctaaccagattcgcacaattcctaagaaggcaaat
gctgaaccccctacttggtccctcaagatagttggaaggatcttggaagaggggatagat
cctgatcaagctgggatgatgcagagatcgagttccttgtacccaaagttctcatctttc
ttcaaaagagtcaccatttccttggatcagagactatatccagaaaaccatattattatg
tgggatagtgctcgatcacctcaacatcaggaaggctttgaagtaaagaggaaaggggat
aaagaatttacggcaaatatacggttagaaatgaattatacgcctgagaagtttaagctt
tcaccagcattgatggaagttcttggtattgaggttgatacccgcccgagaatcatagct
gctatctggcattacgtaaaggctagaaaattgcagaacccaaatgatccgtcttatttt
aactgtgatccaccactccagaaagtatttggggaagaaaagatgaaattcaccatggtt
tcgcagaagatatcccatcatttatctcctccgcaacctatacatttggatcacaagatc
aagctttcagggaatagtccagctggaaatgcatgctacgatgtgttggtggatgttccc
tttccaatccaaaaggaattgaatactttattagccaacacagagaaaaccaaggagatt
gatacttgcgatgaagcaatttgtactgctataaggaagatccacgagcaccgtaggaga
cgagccttcttccttggcttcagtcaatcgccagtggaatttatcaataatttgattgaa
tctcaaagcagggatctgaagcttgtagcaggggaagcaagtcgtagtgctgaaaaagat
tcagattcgtcagatttcttcaatcaaccatgggttgaagatgctgttattcgttatctg
aatcgcaagccagttgcagatggtcctggaagcacatga
DBGET
integrated database retrieval system
