Camellia sinensis (tea plant): 114256802
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Entry
114256802 CDS
T07364
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114256802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114256802
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114256802
mRNA degradation factors
5'-3' decay
Lsm complex
114256802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
114256802
NCBI-ProteinID:
XP_028052278
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDI
YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSEAEIKRAQKAEREATDLKGSMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggaccagaagatatctatctatcaacctctcttgcaagctatcttgat
aagaagcttcttgtattgcttcgagatggtagaaagctgttgggaatacttcgttcattt
gatcaatttgccaacgctgttcttgaaggtgcgtgtgagcgagttattgtaggtgatata
tattgtgatatcccgttaggtctgtacgtaatccgtggggagaatgttgtcttaatcggc
gagctggacttggagaaggaggaacttcccccacatatgactcgtgtttcagaagcagag
ataaaacgggcacaaaaagcagaaagggaggctacagacctgaaaggttcgatgaggaag
aggatggagttccttgatatggactaa
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