Camellia sinensis (tea plant): 114257678
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Entry
114257678 CDS
T07364
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114257678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csin03036
]
114257678
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
114257678
SWR1 complex
114257678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114257678
NCBI-ProteinID:
XP_028053256
LinkDB
All DBs
Position
Unknown
AA seq
2077 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPKGPRRPKTHWDHVLEEMVWLSKDFESERKWKLALA
KKVAIRASKGMLDQATRGEKKVKEEEQRLRKVAVNISKDVKKFWMKIEKLVLYKHQAELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVSSPMSSKAVHSCTAAQEQLSIQHKEGDEKR
INISVGLDVESQSNVADVDEDFDLRSEDESEDDEHTLEEDEAFITEEERLEELVALHNEV
DLPLEELLKRYDMDKASRESSPELKVHGAEPTQKGEDDSESRSDGLSSPPKIDEGNSLAV
PGRRCGESNGSISILENHNSEVEANKIGNLSKSSQGLYKKHMLYDFHDEQEDGDFVLAAG
EEKDDETTLSEEEELAKAESNEPIDEVVLLQKESEIPLQELLARYKQECNIDEDAEEDDS
ESTCASASEDLLSSPAMEDAEPKQQHVPMEEDDEPKQQHVSMEEDDKPSELQHVVGPITE
EVVEPKIILEDGTESENRIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIG
LDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWAPHLIVVPTSVMLNWETE
FLKWCPAFKILTYFGSAKERKIKRQGWMKPNSFHVCITTYRLVIQDSKVFKRKKWKYLIL
DEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKD
WFGNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPMKHEHVIYCRLSRRQ
RNLYEDFIASTETQATLASANFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMTGINIQL
SSSICSVLTPDLFSTVDLSGLGFLFTHLDFSMTSWENEEVQAIATPSSLIEGRAADLVNI
DEIEHGFKHQKKLQETNIFEGIRKALLEERLRQAKEWAASVAWWNSLRCRKKPIYSTTLQ
ALITVSQPVYDVQHQKGNPLSNSSKLADIVLSPVERFQKMIDQVESFMFAIPAARAPPPV
CWCSKTGTSVFLHPTYKKRCTEILSPLLTPLRPAIVRRQVYFPDRRLIQFDCGKLQELAV
LLRRLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPK
IFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLVSHS
TIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFLGHQTIPSRSMQKEKNFSTN
GIEVSVSNDDVEAALKYAEDEADYMALKKVEQEEAVDNQEFTEEAIGKLEDDEFINEDDI
KVDESAAPNDLITASNKENGLMLNGSDINEERALTFVAKEDEGDMLADVKQMAAAAAAAG
QAISSFENQLRPIDRYAIRFLELWDPIIDKTTMESEVRFEETEWELDRIEKLKEDMEAEN
DDDEEPLVYERWDADFATEVYRQQVEALAQHQLLEELEEAKEKEHADHEISDSMKNDVST
VSKPKSKKKPKKAKFKSLKKGALASESKAMKEELPIEVMSIDDGITSHEATTSSEMVSLR
PNVGKKRKAAPDADEVKSKKKSKKVKKALEISAVVLDSDMPSKQVDEPKDSKLCESVVDL
VQKPISRSKMGGKVSITAMPVKQVFMIKPEKFKKKGTIWSRDCFPSPDSWLPQEDAMLCA
IVHEYGPHWSLVSETLYGMTAGGFYRGRYRHPVHCCERFRDLVQRYVLSAAENPNNEKTV
NAVSGKALLKVTEDNIRVLLDVATELPDNESLLQKHFFALLGSFWRMTSRLDRRQSFSSS
RNGFHTGGSHSTSVVSQIGLNSTRWPSEKMKFTNLSQCSKLVAAALCDANSARQDGVLIL
NPREETPAVVDQLEITLELQRERGDSMIPLPSVINLSICGPDPPAAASMPAGANQHLRSS
QSMAESRFRTASGACIEGSLGWASSAFPTGDIKYRTASKSPSLGKHKLPICESVKPSKSK
ARKTNMVSTDQRHSLVADPVVQPMLTVPNDSSTRFDLPDPGMGMRMDAFDSSSTFDMDEV
SFLETQDFDLFPHDYVPWLISELDECSPSLPEFTDIG
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtccaaggtctaagcttgatcatgaaacaagggctaggcgacaaaag
gcacttgaagctcctaaagggcctcggcgccctaaaacgcattgggatcatgttttagaa
gagatggtttggttatcaaaggactttgagtcagagagaaaatggaaattggccctggca
aagaaggttgctataagagccagcaagggcatgttggaccaagctacaaggggagagaag
aaagtgaaggaagaagagcagcggttgagaaaagtagcagttaatatttctaaggatgtg
aagaaattctggatgaaaattgagaagctggtgctctacaaacatcaagcagagcttgat
gagaaaaagaaaaaagcacttgataaacagcttgagtttcttctggggcaaactgaaagg
tactcaacaatgctagcagaaaaccttgtgagctcaccaatgtcttctaaagcagtacat
tcatgcacagctgctcaggaacaactgagtattcaacacaaagaaggagatgaaaagagg
ataaatatttctgttgggttagatgttgaatctcagtcaaatgttgcagatgtcgatgaa
gattttgatttacggtctgaagatgaatcggaagatgacgagcatactcttgaggaagat
gaagcttttattactgaagaagaacggctagaagaactcgttgctctgcacaatgaagta
gatctacctcttgaagagctactcaaacgatatgatatggataaagctagcagagaaagt
agtccagaactgaaggtgcatggtgctgagccaactcagaagggagaagacgacagtgag
agtagaagtgacggtctttcttctcccccgaagattgatgaaggcaactcacttgcagtc
cctggtcgtcgttgtggtgaaagtaatggtagtatatcaattttagaaaaccataattca
gaagttgaagcaaacaaaattggaaatctatcaaaaagttctcaagggctgtacaaaaag
catatgctatacgactttcatgatgaacaggaggatggggattttgttcttgcagctgga
gaagaaaaggatgatgagacaaccttgtcagaggaggaagaactggcaaaggctgaatca
aatgagcccatagatgaggttgtgttactgcagaaggagagcgaaattcctttacaagaa
ttgcttgcaaggtataaacaggaatgcaatattgatgaagatgccgaggaggatgactct
gagtctacatgtgcatcagcttctgaggatttattatcttctccagcaatggaagatgct
gaaccaaagcagcaacatgttccaatggaggaagatgacgaaccaaagcagcagcatgtt
tcaatggaggaagatgacaaacctagtgaacttcagcatgttgtgggtcccattacagag
gaggtagtagaacctaagataatattggaagatggaacagagagtgagaatagaattgct
gatgcagctgctgctgcaagatctgcacagccaactggcaacacattctcgacaaccaaa
gtgcgtacaaaatttccttttcttcttaagtaccctcttcgtgaatatcagcatattgga
ttggactggcttgttacaatgtatgagaaaagacttaatgggattctagctgatgaaatg
gggcttgggaaaactattatgacaattgctcttctagcacacctcgcatgtgaaaagggt
atatgggccccacatctcattgttgtcccaaccagtgtcatgctcaactgggaaactgag
tttctcaaatggtgtcctgcttttaaaatattaacatattttggaagcgcaaaagagcgg
aaaattaagaggcaagggtggatgaaacctaattctttccatgtatgcataacgacttac
agacttgttatacaagattctaaagtttttaagcggaagaaatggaaatacttgattttg
gatgaagctcatttgataaaaaactggaagtctcagagatggcaaactcttcttaatttc
aattcaaaacggcgtatccttttaactggtacaccactgcagaatgatcttatggaacta
tggtctttaatgcatttcttgatgccacacatttttcagtctcatcaggaattcaaggat
tggtttggtaatccaatatctggaatggtagagggacaagaaaaagtaaacaaggaagtt
gttgatcgcttgcataatgtccttcgtccatttattctccgtcgattgaaaagagatgtg
gagaagcagcttcctatgaaacatgagcatgtaatttactgtagactctcaaggagacag
cgtaacctgtatgaagattttattgctagcacagagacacaggctactttagcgagtgcc
aattttttcggaatgattagtgttataatgcaacttcgcaaagtttgcaaccatcctgat
ttgtttgaaggtcgtccaattgttagttcttttgatatgactggcattaacatccaattg
agttcttctatttgctcagtgcttacaccggacctattttctactgttgacctcagtggt
ttgggatttttatttacccatctagatttcagcatgacttcatgggagaatgaagaagtt
caagctattgctacgccctcgagcttaattgagggacgtgctgctgaccttgttaatata
gatgaaattgagcatggttttaagcatcagaaaaaattgcaagaaacaaacatctttgaa
gggatccgaaaggcacttttggaggagagactacgacaagcaaaggaatgggcagcatcc
gttgcatggtggaattccttgaggtgcaggaaaaaaccaatatactcaactactttacag
gctctcattactgtaagccaacctgtgtatgatgttcaacatcaaaagggaaaccctttg
tcgaactcctctaagcttgctgacattgtactgtcgccagttgaacgcttccaaaaaatg
attgaccaggtcgaatccttcatgtttgcaatcccagctgcacgggcaccaccacctgtt
tgctggtgcagtaaaactggaacttctgtgtttctgcacccaacttataagaaaagatgc
actgaaattttgtctcctcttctaacacctttgcgccctgcaattgtccgcaggcaagta
tattttcctgacaggcgactcatacaatttgactgtggtaagttgcaggagcttgcagtt
ttgcttcggcgattgaagtcagaaggtcaccgggcactaatattcacccaaatgacaaag
atgcttgatatcttggaggctttcataaatttgtatggttacacttacatgcgtttagat
ggatccacccagccagaagagaggcaaacattgatgcagcggtttaatacaaacccaaag
atttttctatttatattatcaacccgcagtggtggtgttggcatcaatcttgttggggcg
gatactgttatcttttatgatagtgactggaatcctgccatggatcaacaagcacaagat
cgatgccacagaataggacagacacgtgaagtgcatatttatcggttagtcagtcacagt
accatcgaagagaacattttaaaaaaggcaaatcagaagcgtgctcttgatgatttggtt
atacagagtggaggctacaacaccgaatttttcaagaaactggaccctatggaattgttt
ttgggccatcaaacaattccatcaaggagcatgcagaaagagaaaaatttctccaccaat
ggaatcgaggtatctgtatctaatgatgatgtggaggctgctttgaagtatgcagaagat
gaagcagactacatggctttgaagaaagttgaacaggaagaggctgtggacaatcaagag
ttcacagaagaagcaattgggaagttagaagatgatgagtttataaatgaggatgatata
aaggttgatgagtctgctgctccaaatgacttgattactgcttcaaataaagaaaatggg
ttaatgctaaatggaagtgacataaatgaagagagagctcttacatttgtggctaaagaa
gatgaaggcgacatgctggctgatgtcaaacagatggctgcagcagctgcggcagctggc
caagcaatctcatcctttgagaatcaactacgtccaattgaccgttatgctattcgtttt
cttgagttgtgggaccctatcatagataagacaacaatggaatcagaagttaggtttgag
gaaactgagtgggagctggatcgtattgagaagttaaaggaggatatggaggcagagaat
gatgatgatgaagaacctcttgtctatgaaagatgggatgctgattttgctacggaggta
tatcgacagcaagttgaggccttggcacaacatcagctgttggaagagctggaagaagct
aaagagaaggaacatgcagatcatgaaatttctgattctatgaagaatgatgtttctact
gtttctaaacccaagtcaaagaagaaaccaaagaaagccaagttcaaatctctgaagaaa
ggagctctagcttctgaatcaaaagccatgaaggaagagcttccaattgaagttatgtcc
atagatgatgggatcacctctcatgaggcaaccacatcttcagaaatggtgtcattacgt
ccaaatgtggggaagaaacgtaaagcagcaccagatgctgatgaagtgaagagcaagaag
aagtccaagaaagtcaagaaggctcttgaaatatctgctgtagttttagattccgatatg
cctagtaagcaggttgatgaaccaaaagattcaaaattatgcgagagtgttgttgatctt
gtgcagaagccaataagcaggagcaagatgggaggcaaagtttccattactgctatgcct
gtaaagcaggtcttcatgataaaaccagagaagtttaaaaagaagggtactatttggtct
agagattgttttccttcgccagattcttggttgcctcaggaggatgcaatgttgtgtgct
attgtacatgaatatggcccacattggagtttggtgagtgagactttgtatgggatgact
gctggtggtttttatagaggaagatatcggcatcctgtccactgttgtgagaggtttagg
gatcttgtccaaagatatgtcttgtctgcagcagaaaatcctaacaatgaaaaaaccgtc
aatgctgtctctggaaaggctcttctcaaagtgacagaggataatattcgtgtgctgttg
gatgttgccactgaactgcctgataatgagtcacttcttcagaagcacttctttgcactg
cttggttcattctggagaatgacatcccgccttgatcgccgtcagagtttttcatcttcc
cggaatggcttccatactggtggaagccattccacttccgtggtcagccagattggtctg
aattccacaaggtggccatcagagaagatgaaattcactaatttaagtcaatgtagcaag
ttagtagcagctgcactctgtgatgcgaacagtgcacgacaggatggagtcttgattttg
aacccgagagaagaaactccagcagttgtggaccagttggagattactctggaacttcag
agagaaagaggcgactctatgattcctttgccatctgttataaatctctcaatatgtggc
ccggatccacctgctgctgcaagcatgcctgcaggagcaaatcagcatcttagatcttcc
caaagtatggctgagagccgtttcaggactgcatcaggagcttgtattgaaggttctttg
ggttgggcttcatcagccttcccaacaggtgatatcaagtatcgaacagcatcaaaatca
ccgtccttgggaaaacacaagttgcccatatgtgagtcagtcaagccttccaaatcaaaa
gcgagaaaaactaatatggtgtctactgatcagcgtcacagcttagttgctgatccagtg
gtccaaccaatgctcactgtacccaacgattctagtacgaggtttgatcttcctgatccc
ggaatgggaatgagaatggatgcttttgatagtagttctacctttgacatggacgaggtc
tcttttttggagacgcaggattttgatcttttcccacatgactacgttccttggttaatc
tcagaactagatgaatgttctccatctttgcctgaattcacggatattgggtag
DBGET
integrated database retrieval system
