Camellia sinensis (tea plant): 114257684
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Entry
114257684 CDS
T07364
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114257684
09123 Folding, sorting and degradation
03018 RNA degradation
114257684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114257684
03041 Spliceosome [BR:
csin03041
]
114257684
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114257684
mRNA cycle factors
Stress granule specific factors
114257684
Spliceosome [BR:
csin03041
]
Complex C
Other components
Complex C specific factors
114257684
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
RRM_occluded
RRM_ACIN1
RRM_Nup35
RRM_3
RRM_MARF1
DUF3560
Motif
Other DBs
NCBI-GeneID:
114257684
NCBI-ProteinID:
XP_028053264
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MWLYVSDLDTSVTESQLYDLFNKQGEVISVRIARDLVTQRSFGYGFIYYANRENARRAFE
LLNLHVLNGKPLRIAYSPGGVGKIFIKNLDKAIGHHELYHVFSEVGDILSCKIAKDDSGQ
SKGYGFVLYDSEEGRQSAIEKLNGIVLNGKPVYVEPFCHKNEREMLLEKAKGTNLYVRNL
STSITEEDLKKIFGEFGTISSAAVMKDADGNSKCFGFVNFESADDVARAVESLNGQNIDN
NNEWYVAIAQKKSDRELELKLQFENMLYIKNLDDCVGDDKLKELFSPFGIITSCKVMRGS
NGISRESAFVAFSTSEEASRALLEMNDKIVFGKPLYVAHAQRKEDRRARWKVQVHPEAVN
VGGNQSMRTSLYVSDLELNVTALQLFDLFNQLGQVVSVQVCGDFTTQRSHGYSYVNYSNP
EAAGRALEVFNLYPLNGKPIRIRYSHRGAGNIVVKNLDEAIDHGALHDVFSSFGNILSCK
VATDDSGQSKGYGFVLYDSEEAAQKAVEKFNGMVLNDKKICVGPFRKKHEREMALEKEKL
TNVVEGVDKSQRLNLYIKHLDDSIGDDKLKELFSPFGTITAYKVLRDANGISRKSGFVAF
STPEEASTALVEMNGKMVVSKPLYVAYAERKKDRRVRLQAQFSQMHAVAMVPSVAPCMPI
KPPCGLGLGEQIFGGQARPAITLPQGQYPCGRHAGGVPVQQGQQPVPLMQEQAQLSQMCP
VAVAPLVSPCMPICSSGGHGLGQQIFHGQAPPAITPRQQQLVPGTRPGQLPIPNFFLPVV
QQGQYPGSRHAGGVPVQQGQQPVPLMQEQAQFSRMHPVAVAPLVSPCMPICPSGGSGLGQ
QMFRGQAPPAVTPPQQQLVPGTRPGQLPIPNFFVPLVHGIHPGGRHAGGVPVQQCQQPVP
LMQQQMLPRGQIYHYPTGRGLPDVSMSGVAQGMLSIPYHIIGGMPLRDGGISQPTPIGSL
AFALSNFSPADQRTMLG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgtatgtcagtgacctcgacacgagtgtgacggaatcgcagctgtatgatctg
tttaacaagcagggtgaagtgatctctgttcgaatagcaagggacttggttactcagcga
tcattcggttacggctttatttactacgcaaaccgagaaaatgctaggagggcatttgag
ctactgaaccttcatgttctgaatggaaagccccttaggatagcatattctcctggcggg
gttggaaaaatttttattaagaatttggacaaggctattggccaccatgaactatatcac
gtgttttctgaagttggagatattctctcttgtaagatagcaaaagatgactctggtcag
tcaaaaggctacgggtttgtgctatatgatagtgaggaaggtcgccaaagcgctattgag
aagcttaatggtattgtgttgaatggtaagccagtatatgtggaacccttctgtcataag
aacgaaagagaaatgcttttggagaaggcaaaaggcaccaatctctatgtgagaaattta
tcgacatcaataactgaagaagatctgaagaaaatatttggtgaatttggaacaatctct
agtgctgcggtgatgaaggatgctgatggaaattctaagtgcttcggttttgtcaacttt
gagagtgcagatgatgttgctcgagctgttgagtctcttaatggacaaaacattgataat
aataatgagtggtatgttgcgatagcccaaaaaaaatctgacagggaacttgaattgaaa
cttcaatttgagaacatgctatacattaaaaatttagatgattgcgttggtgatgataag
cttaaggaattgttctctccatttggtatcataacttcatgcaaggttatgcgaggctct
aatggaataagtagggaatcagcatttgttgcattttctacttccgaagaggcatctaga
gcactattggagatgaatgacaagattgtttttgggaaacctctttatgttgctcatgca
caacgaaaagaagatagaagagcaagatggaaggttcaagtccaccctgaggctgtgaat
gttggtggaaaccagtctatgaggacatcgctgtatgtcagtgaccttgagctgaatgtg
accgctttgcagctatttgatctgtttaaccagctgggtcaggtggtatctgttcaagta
tgtggggatttcactactcagcgatcgcacggttacagttatgttaattattcaaaccct
gaagctgctgggagggcattggaggtgtttaacttgtatcctctgaatggaaaaccaatt
aggataagatattctcatcgtggggctggaaacattgttgttaagaatttggatgaggct
attgaccacggagcactacatgatgtgttttcttcatttggaaatattctctcttgtaag
gtagcaacagacgactctggtcagtcaaaaggctatgggttcgtgctgtatgatagcgag
gaagctgcacaaaaagctgttgagaagtttaacggtatggtgttgaatgataagaaaata
tgtgtggggccctttcgtaagaagcatgaaagggaaatggccttggagaaggaaaaactg
accaatgtggtggagggagtagacaaatctcaacggctaaacctgtacattaaacattta
gatgatagcattggcgatgataagcttaaggaattgttctccccatttggtaccataact
gcatacaaggttttgcgagacgctaatggaataagtaggaaatcaggatttgttgcattt
tctactcccgaagaagcgtctacagctctggtggagatgaatggcaagatggttgtcagc
aaacctctttatgttgcttatgcagaacgaaagaaagatagaagagtgagattgcaggct
caattttctcaaatgcatgcagttgcaatggtgccttcagttgctccttgtatgccaata
aaacccccttgtgggctgggtcttggagaacaaatattcggtggacaagctcgtcctgct
atcacacttccccaaggtcagtatccttgtggcagacatgcaggaggtgttccagtgcag
cagggccaacagccggttccacttatgcaggagcaggctcaactttctcaaatgtgtcca
gttgcagtggcacctttagtttctccttgtatgccaatatgctcctctggtggtcatggt
cttggacaacaaatattccatggacaagctccgcctgctatcacaccccgccaacagcaa
cttgtaccaggaacacggcctggtcaacttcccattccgaatttctttttgccagtggtt
cagcagggtcagtatcctggtagcagacatgcaggaggtgttccagtgcagcagggccaa
cagccggttccacttatgcaggagcaggctcaattttctcgaatgcatccagttgcagtg
gcacctttagtttctccttgtatgccaatatgcccctcaggtggttctggtcttggacaa
caaatgttccgtggacaagctccgcctgctgtcacacctccccaacagcaacttgtacca
ggaacgaggcctggtcaacttcccattccgaatttctttgtgccactggttcacggcata
catcctggtggcagacatgcaggtggtgttccagtgcagcagtgccaacagccggttcca
cttatgcagcagcagatgctgccaagggggcagatctaccattatcccacagggcgtggc
ctgcctgatgtttccatgtcaggtgttgctcaaggcatgctttccattccttaccatatt
attggtgggatgcctttgcgtgatgggggaatatctcaaccaactccaattgggtcattg
gcttttgccctttcaaatttttctcctgcagaccagaggacgatgctgggctaa
DBGET
integrated database retrieval system
