Camellia sinensis (tea plant): 114258246
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Entry
114258246 CDS
T07364
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114258246
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114258246
Factors involved in mRNA localization
Other mRNA localization factors
114258246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
114258246
NCBI-ProteinID:
XP_028053953
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGSTNSPIEYTDVSAYRLSLSEDTKA
LNQLNTLIQEGKDMTSVLYTYRSCVKALPQLPDSMKQSQADLYLETYRVLDLEMSRLRDI
QRWQVSAASKLAADMQRFSRPERRINGPTVTHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFPKFSAQARLLTLPSPHELPPREAQDYQRHYLIINHIGAI
RAEHDDFTIRLASAMNQLVLLKSIDGVDIEWCKEVKGNIYDMVVEGFQLLSRWTARIWEQ
CAWKFSRPCKDPVPTESHDTSASFSDYEKVVRYNYSPDERKALVELVSYIKSIGSLMQRC
DTLVADALWETIHGEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKPE
SELQQLQHGGEESKGNFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRKPGGLFGNSGSEI
PVNDLKQLETFFYKLSFFLHILDYTETVATLTDLGFLWFREFYLESSRVIQFPVECSLPW
MLVDHMIESQNAGLLESVLMPFDIYNDSAQQALVILKQRFLYDEIEAEVDHCFDIFVSKL
CETIFTYYKSWAASELLDPSFLFALDNGEKFSVQPMRFTALLKMTRVKLLGRAINLRSLI
AERMNKVFRENIEFLFDRFESQDLCAIVELDKLLNILQLAHELLSRDLSIDSFNLMLSEM
QENISLVSYSSRLASQIWTEMQNDFLPNFTLCNTTQRFVRSSKVPLAPVQKPSIPYAKAN
FYCGTQVEHHQFSTITEVNVFNTALSLQNEITTLEPMITGLQDALPKSIGLLPFDGGVTG
CLRLVKEHLNWGSKSELKAEVLRGIKEIGSVLYWMGLLDIVLREVDITHFMQTAPWLGLI
PGADGQILQSQDGGDSPIVTLFKSATSAAVSNPGFSNPTAFYTISKQAEAADLLYKANMN
TGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITTSKDFYRIFSGLQIEYLEGSVQVSP
SNHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQVLNVAEVEAAPIMHTQKYAHSVQGW
EALLEAMKKARRLNNHVFSMLKARCPLEDKQACAIKQSGAPLHRIKFENTVSAFETLPQK
GS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctgttgaagaagctattgcagctttatctactttctcgttggaggatgaa
caacctgaagttcaaggtccaggagtttgggtgtcaactgaaagaggttcaacgaatagt
ccaattgaatatactgatgtttccgcataccgcctatctttatcagaagatacaaaggct
ctaaatcagctgaacacccttattcaagaggggaaggatatgacatcagtgctctataca
taccgaagttgtgtcaaagcacttcctcagcttccagattccatgaagcaaagccaggct
gacttatatctagaaacttatcgagttctagacctggaaatgagtcgactgcgtgacatt
cagcgttggcaagtatcagctgcatctaaactagcagctgatatgcaacgcttttctagg
cctgagcgacgtatcaatggccctactgtaactcatctctggtccatgttgaagttactt
gatgttttggtgcaacttgatcatcttaaaaatgcaaaagcaagcatacctaatgatttc
tcttggtataagaggaccttcactcaagtcagtattcagtggcaagacaccgattcaatg
agggaagagttagatgatttacagattttcttgagcacaaggtgggcaattttgttgaac
ttgcatgttgagatgttccgtgtaaacaatgtagaagacattcttcaggtcctcatagtt
ttcgctgttgagtctctggagttggattttgcacttctgtttccagaacggcatattctt
cttcgtgttttgcccgttcttgttgtcttggcaacatcatctgagaaagatagtgaatca
ctatataagagggtgaaaattaacagactgatcaatatattcaagaatgatccggtcata
cctgcattcccagatcttcatctttctccagctgcaatcttgaaagagttgtcgatgtac
ttcccaaaattctctgcccaagctcgtctcctcactcttccatcaccgcatgaactccca
ccccgtgaagctcaagattatcagcgacattatctgatcatcaatcacattggagcaatt
cgtgctgaacatgatgacttcacgattcgtttggcttcagctatgaaccagctagtgtta
ttgaaatcaatagatggtgtagatattgagtggtgcaaggaagtcaaaggaaacatatat
gatatggttgttgaaggttttcaactcttaagcaggtggaccgctcgcatttgggagcaa
tgtgcatggaaattctctcgtccctgcaaggatccagttcctacagagtcacatgataca
tcagcatcattttcggactacgagaaggttgtacggtataattacagtccagatgaaagg
aaagctttggttgaacttgttagctacattaagagcattggatccttgatgcagcggtgt
gacacattggtagctgatgcattatgggaaacaatccatggcgaagttcaggattttgtg
caaaatacattagcaactatgttgcggacaacctttcgaaagaagaaggacctatctagg
attctttccgatatgcgtacactttcagcagactggatggcaaatacgagcaaacctgaa
tctgagttacaacaattacagcatggaggtgaagaaagtaaagggaacttcttttatcca
aggccagttgcgccaactgctgcacaggtgcactgcttgcagttcctgatatatgaggtg
gtatcaggtggtaatctgaggaagcctggggggctttttgggaatagcggctctgaaatt
cctgttaatgatttgaaacaattggaaactttcttctacaagcttagctttttcttgcat
atattagactatacagaaactgttgcaactctgacagatcttggttttttgtggttcaga
gaattttatttggaatcttctcgcgtaattcagtttcctgttgaatgctctcttccctgg
atgctggtggatcatatgattgagtcgcaaaatgcaggtcttctggagagtgttttaatg
ccatttgacatctataatgattctgctcagcaagcattagttattctcaagcaacgcttt
ctctatgatgaaattgaagctgaggtggatcattgttttgatatatttgtttcaaagctg
tgtgagacgatttttacatattacaaaagttgggcagcaagtgagctacttgatccctca
ttcctttttgccctggataatggggaaaagttttctgtccaacctatgagattcactgca
ctactaaagatgactcgagttaagttattgggaagggcaattaatttaagaagtttgatt
gctgagaggatgaacaaagtcttcagggagaacattgaatttttgtttgatcggtttgag
tctcaggatctatgtgctattgtggaattggataaacttctgaacatcttgcagcttgct
catgaattgttatctagagatctttcaatcgactcattcaatctcatgttgagtgagatg
caagagaatatatctcttgtttcttattccagtcgacttgcttctcagatttggacagag
atgcaaaatgattttttaccaaacttcacgctatgcaatactacacagcgatttgttcga
tcatcgaaagtaccccttgctcctgttcagaagccttcaattccttatgctaaagcgaat
ttctactgtggtactcaggtagaacatcatcaattcagcaccatcactgaagtgaatgtt
ttcaatactgcattgtctttacagaatgaaataactaccctcgaaccaatgatcacagga
ctgcaagatgcattgccaaaatcaattggacttcttccttttgatggaggagtaacaggt
tgtttgaggcttgtcaaagaacatcttaactgggggtcaaaatcagaactcaaagcagag
gttcttcgtggaataaaggagattggaagcgtattatactggatggggcttcttgatatt
gttctgagagaagtagatatcacgcatttcatgcaaacagccccatggttaggcttgatt
cctggtgcagatgggcaaatattgcagtcccaagatgggggagatagccctatcgtcact
ctcttcaaatcagcaacttctgcagctgtgtcaaacccagggttctcaaatccaacagca
ttctacaccatatcaaaacaggcagaagctgctgatctgttgtacaaagctaacatgaat
actggaagtgtgctggaatatgcccttgcttttacaagtgcagcattggataaatattgt
accaaatggagtgcagctccaaagactggattcattgacattacaacttctaaagacttc
tatcgcatatttagtggcctccaaattgagtatctggagggatctgttcaagtatcacca
agcaatcatgaagtgctaggtgattcagtagcctggggtggttgtactataatataccta
cttggccagcaactgcactttgaactgtttgatttttcatatcaagtcctcaatgttgca
gaagtggaagctgcaccaattatgcatactcagaagtatgctcattctgtgcaggggtgg
gaagccctactagaagcaatgaagaaagcaaggaggctgaataatcatgtgttttcgatg
ctgaaagcccgctgcccgctggaagacaaacaggcatgcgccattaagcaaagtggtgcc
ccgctacatcgcatcaagtttgaaaacacagtctctgcatttgaaacgttgccgcagaaa
ggttcttaa
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