Camellia sinensis (tea plant): 114258287
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Entry
114258287 CDS
T07364
Name
(RefSeq) THO complex subunit 5A isoform X1
KO
K13174
THO complex subunit 5
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114258287
09122 Translation
03013 Nucleocytoplasmic transport
114258287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114258287
03041 Spliceosome [BR:
csin03041
]
114258287
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114258287
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114258287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
TP_0454_N
Motif
Other DBs
NCBI-GeneID:
114258287
NCBI-ProteinID:
XP_028054017
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MEVSMEEGEAVACSEEFGELAPPQPTLQKSAYDMLQQSRTSVEEIVTKMLSIKRESKPKS
QLREVVTQMLLNFVALRQANRSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKSHYVK
AIKACKDFKSKHPDIQLVPEEEFFRDAPEDIKSSVISNDSAHNLMLKRLNFELFQRKELC
KLHEKLEQQKQKLLETIANRKKFLSSLPSHLKSLKKASLPVQHQLGVLHTKKLKQHHLAE
LLPPPLYVIYSQFLAQKEAFGENIDMEIAGSVKDAQAFARQQANKDTGISSNIENSKLED
DVPEEEDDGQRRRKRPKKVPGKENLDQTGIYQAHPLKIILYIHDDEASDPKSTKLITLKF
EYLIKLNVVCVGIEGSNEGPENNILCNLFPDDTGLELPHQSAKLHVGDALTFDERRSSRP
YGWAQHLAGIDFLPELSPFLTSCETTGNETAKNAAVISGLSIYRQQNRVQTVVQRIRSRK
KAQLGLADQLDLLLKLKWPSLTCESVPWASHTPLCSLHGWSPNHASSLPVVDVEQGQGPS
DMDMDGRSGTSREEVENAREDGELPSLVPVSAVVNDVKLTPKGSDLEHSKRLSLISKSMV
SPIGMAKSQSFRKNYEDSELLLDSESDLDEPVQIDQETENTALIGRYEMVGNSWADYGVQ
EYSLVLTRTVDNNKTNMKLEAKIKISKEYPLRPPYFTLSLSTALLGENHSESGGSEWYNE
LRAMEAEINVHTLKLIPLDQENFILGHQVRCLAMLFDFYMDEGAPSSERRKSTSVVDVGL
CKPVSGSLLARSYRGRDRRKMISWKDSGCTPGYPY
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgagcatggaagaaggagaggcggtggcttgttctgaggaatttggagagtta
gcaccaccacagcccacgttacagaagtcggcgtacgatatgctgcagcagagcaggact
tcagtggaggagatcgtgaccaagatgctctccatcaagcgagaatccaaacccaaatcc
caactccgtgaggtcgtcactcagatgctcctcaatttcgtcgctcttcgtcaggcaaat
cgttccatcttgcttgaagaagatcgtgtaaaagcagaaacagaacgtgcaaaagcacct
gttgacttcacaacgttgcagctccataacttgatgtatgagaaaagtcattatgtgaaa
gcaataaaagcttgcaaagacttcaagtctaaacatcctgatattcagcttgtgcctgag
gaagaattttttagagatgcaccggaagatattaaaagctctgtaatatcaaatgacagt
gcacacaatttgatgctcaagaggctcaatttcgagttgttccagcgcaaagaattatgc
aaacttcatgagaaactcgaacaacaaaagcaaaaacttctggagaccattgctaacagg
aagaagttcttatcgagtcttccttcacacctcaagtcgcttaagaaagcatcattgccc
gtacagcaccaactgggggttctgcatacaaagaaactgaagcagcatcacttggcagag
ttgcttccccctcctctttatgtgatttactcacagttcttggcccaaaaggaagcattt
ggggaaaacattgatatggagattgcaggaagtgtgaaggatgctcaagccttcgctcga
cagcaagcaaataaagacactggtatttctagcaacatagagaattccaagttggaggat
gatgtacctgaagaggaagatgatgggcaaagaaggagaaagcggccaaagaaggttcca
ggcaaagagaatcttgaccagacaggaatatatcaagctcatccactgaaaatcattctc
tatatacatgatgatgaggcttctgatcccaagtctacaaaactaatcactctgaagttt
gaatacttaataaagttgaatgttgtatgtgttgggattgaaggctccaatgaaggacct
gagaataacatcttatgcaacttgttccccgatgacactggccttgaacttcctcaccag
tcagccaagctccacgttggtgatgccctgacatttgatgaaaggagaagttcacgtcca
tatgggtgggcccagcatttggctggaattgattttttgccagagctatcaccatttctt
acaagctgtgaaactacaggcaatgaaacagctaaaaatgctgcggttatatctggtctc
tccatataccgtcagcaaaatcgcgtacagacagttgtgcaaaggattcgctctcggaaa
aaggctcagctgggtcttgcggatcagcttgatttacttttgaagcttaaatggccttct
ctgacttgtgaaagcgttccatgggcctcgcatacccctttatgcagtttgcatggttgg
tcacctaatcatgcttcgtctttgcctgttgttgatgtggaacaaggtcagggcccttca
gacatggatatggatggaaggtctggtacttcaagggaagaggtagaaaatgcaagggaa
gatggggaacttccatctttagttccggtctcagctgtcgtaaatgatgttaaactcact
ccaaaaggatccgatcttgagcactccaaacggctgtctttgatttcaaagagtatggtt
tctccaatcgggatggcaaaatctcaaagtttcaggaaaaattacgaggattcagaactc
ctgctggattctgaaagtgatctggatgagcctgtacaaattgatcaagagacagaaaat
acagccttgattgggcgctatgaaatggttggaaattcttgggctgactatggtgtgcag
gaatattctcttgttttaaccaggactgtggacaataacaagacgaacatgaagttagaa
gccaagattaagataagcaaggagtatcctcttaggcccccttattttacactgagtctt
tctactgcattgcttggagaaaatcattccgagagtggtggttctgagtggtataatgaa
cttcgtgccatggaagcagagatcaatgttcatacattaaagttgatacctctggatcaa
gagaacttcatcttaggccatcaagtacgttgtctagcaatgctgtttgacttttacatg
gacgaaggtgccccaagttctgagaggagaaagagtacttccgtggttgatgtaggttta
tgcaagcctgtaagcggtagtctacttgccagatcatatagaggaagagatcgtaggaag
atgatctcctggaaggacagcggttgtacccctggctatccttactag
DBGET
integrated database retrieval system
