Camellia sinensis (tea plant): 114258302
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Entry
114258302 CDS
T07364
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114258302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114258302
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114258302
mRNA cycle factors
Common to processing body (P body) and stress granule
114258302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
114258302
NCBI-ProteinID:
XP_028054052
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MMIVQMDKMSTTPSWEVAQQLYDKNIELENRRRRSAQARVPSDPNAWQQMRENYEAIILE
DHAFSEQHNIEYALWQLHYRRIEEFRAHTNAALASTTSSTSQIVKGPPRPDRISKIRLQF
KTFLSEATGFYHDLILKIRSKYGLPLGYLSEDSGYQIVMEKDGNRSIEMKKGIVSCHRCL
IYLGDLARYKGLYGEGDSKSRDYAAASSYYLQAASLWPSSGNPHHQLAILATYSGDELAA
VYRYFRSLAVDSPFSTARDNLIVAFEKNRQSYSQLHGDMKASVISESPAQITAKGRGKAE
DKLQPKDANVGASLVAKKAASVHDPYKAFCIRFVRLIGILFSRTSLEMFAEVLSLVSSTL
NGLLSSGSEEELTFGTDAVENGLVIVRLIAILIFTVHNVNKDGDGQSYADIVQRTVLLQN
ALAAVFELVGHILKRCVELSDPCSSYLLPGILVFVEWLACSPDVAAGSDREDKQATVRLV
FWNHCISFLNKLLSSGLVVMDDEDETCFFNTGRYEEGETENRLALWEDFELRGFLPLQPA
HTILDFSRKHSVGGDGNKEKIARVKRILAAGKALENVVKVEQKTIIFGLKAKKFILSVKP
QTSDDFMLMPFLGSPKLNGVNRQPPIETMSNAFVVQTNAQLYVEGEEEDEEIVFKPTVME
KCSDLIVSKWMPNEGLEPSKNAVAGNSQFHGSSVSAQHSDLHQRTAVDASSQPPVSVANH
VLQHPQPIPSHSSMWFDQQASLANGFKGLNILENGHVMKPGMPEDTPISHHSSLSLPVQQ
SINVNASGISYSQVKASEMVMQREIDIVGSSGVTSGSFAVNTSSPLSASSRRSPVNRPVR
HLGPPPGFRAVPPPGFSAVPPKSVNELISGSDLVADNLLMDNYSWLDGYKLPLPMNSSVL
NQSINHPSQSSPHHTSNNNVSVGTISFPFPGKQVPPKQFPVEKQKGWEDNHTFEHLNLHH
EQLQLEQLMKGSQQFPLPDQFQGQSMWGARHPV
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgtacagatggataaaatgtctactactccatcatgggaggtggctcaacaa
ctttatgacaagaatatagagttggagaataggcgtcgtaggtcggcccaggcaagagtt
ccctcagatccaaatgcttggcagcagatgcgtgagaactatgaagcaataatactcgag
gatcatgcattttctgagcagcacaatattgaatatgctctgtggcagctacattacagg
cgaatcgaggaattcagagcccacaccaatgctgctttagcttctacaacttcaagcaca
tctcagattgtaaagggtcccccgcgacctgatcgaattagtaaaatacgtctgcagttt
aaaactttcctttcagaagctactggattttaccatgatctaattttgaaaattagatca
aaatatgggcttcctcttggttatctctctgaggattcagggtatcaaattgttatggag
aaagatggcaatagatctattgagatgaagaaaggtattgtatcttgtcatcgttgtttg
atatacctgggtgaccttgctcgttacaaaggattgtatggggagggcgattccaaaagc
cgtgattatgctgcagcttcgagttattacttgcaagctgcatctctttggccatcaagc
gggaatccccatcaccagcttgccatattggctacctattctggggatgaattagcggct
gtataccgttattttcggagtctggcagtcgatagtcccttttccactgcaagggataac
ttgattgtcgcatttgaaaagaatcgccagagttactctcagctgcatggggatatgaaa
gcttctgtgatcagtgaatcacctgcgcagataactgccaaaggaagagggaaagcagaa
gacaaactccaacctaaggatgccaacgttggtgccagccttgttgcaaaaaaagcagcc
agtgtccatgacccctataaagctttctgcattcgctttgttcgtctaattggcattctt
tttagtcgcactagcttggaaatgtttgcagaagttctttctctggttagcagtactttg
aatgggcttctttcttctgggtcagaagaagagctgacttttggcacagatgctgttgag
aatggtctggtcattgttcgccttattgccattcttatattcacggttcacaatgtgaat
aaggatggtgatggtcagagttatgcggatattgtacaacgtacagttctgcttcaaaat
gcacttgctgcagtttttgaattagtggggcacattttgaagagatgtgtggagttgagt
gatccttgttcaagttacctccttcctggcattctagtttttgtggaatggttggcttgt
tctcctgatgttgcagcaggcagtgatagagaagataaacaagcaactgttagactagtt
ttttggaatcattgtatatctttcttaaataagcttttgtcaagtgggctagtggtgatg
gatgatgaagatgagacctgctttttcaatacgggcaggtatgaggaaggtgaaactgaa
aatcggcttgctttgtgggaggacttcgagttgagaggattcttgccccttcaacctgca
cataccattttggatttttcaaggaaacattctgttggaggtgatggcaacaaggagaaa
attgctcgtgttaaaaggattctggcagcaggaaaggctctagaaaatgtagttaaagtt
gagcaaaaaacaataatttttggtttgaaggcgaagaaatttattttgagtgttaaacct
caaacatcagatgatttcatgcttatgccctttttgggcagtcctaaattaaatggtgtg
aatcgccaacctccaatagagactatgagcaatgcctttgttgtgcagacaaatgcacag
ctatatgtggaaggggaagaggaggatgaagagattgttttcaagccaacagtgatggaa
aaatgtagtgatttgattgtttcaaagtggatgcctaatgagggtcttgagcctagcaaa
aatgctgttgctggtaattctcagtttcatggcagttctgtttcagcccagcacagcgat
cttcaccagcggactgctgttgatgcaagttcacaaccacctgtttctgttgccaaccat
gtactgcagcatccacaaccaattccatcacactcttcaatgtggtttgaccagcaagct
tctcttgctaatggcttcaaaggtttaaacatcttggaaaatgggcacgtaatgaaacct
ggaatgccagaagatacacccatttcacaccattcttcactttctcttccagtccaacaa
tctatcaatgtcaatgcaagtggtatatcttatagtcaggtaaaggcgtcagaaatggtg
atgcaacgtgagattgatattgttggttcttctggagttacttctggcagttttgctgta
aatacatcatcaccgttgtcagcaagttcgagaagaagtccagtaaaccgaccagtaagg
catcttggccctccacctggttttagagctgtccctccacctggttttagcgctgttcct
cctaaatcagtaaatgagctcatatctgggtcagatttggtggctgataatctactcatg
gataactatagctggttggatggatataagttgccattaccaatgaatagctcagtgctc
aatcaatctatcaatcatccatcccagtcaagtccccatcataccagtaacaacaatgtc
tctgtggggacaattagctttccctttcctggaaaacaagttccaccaaagcagtttcct
gtggaaaaacagaaaggctgggaggataaccatacttttgaacatctaaatttacaccat
gaacaactgcagctggagcagctcatgaaaggaagtcagcagttcccactgccagatcaa
ttccaaggacagtcgatgtggggggctcgtcaccctgtgtga
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