KEGG   Camellia sinensis (tea plant): 114258663
Entry
114258663         CDS       T07364                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03082  ATP-dependent chromatin remodeling
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114258663
   03083 Polycomb repressive complex
    114258663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csin03036]
    114258663
Enzymes [BR:csin01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114258663
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114258663
   HDAC complexes
    Sin3A-HDAC complex
     114258663
    BRAF-HDAC complex
     114258663
    REST complex
     114258663
    SHIP complex
     114258663
    MiDAC complex
     114258663
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114258663
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114258663
  Chromatin remodeling factors
   NuRD complex
    114258663
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114258663
NCBI-ProteinID: XP_028054450
LinkDB
Position
Unknown
AA seq 468 aa
MGESSVSLPSGPDAKKRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRME
INRPFPAAPDDIRLFHSNDYVDFLASVTPETLHDHTHARHLKRFNVGEDCPVFDGLFSFC
QSSAGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRV
LYVDIDVHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGVLGGKYYALNVPLND
GLDDGSFRGLFQPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRS
FNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPSSV
ENLNSAKDLEKIRTMLLEQLSRLPHAPSVSFQTTPPTTQVPEEVVEHMDRRPKQRIWNGE
DYESDADEDEKPRHQSLNFNPRPIANAEMRDIADGIKEENMTEAYPPS
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgggtgagtcatctgtgtcgcttccgtcggggccggacgcaaaaaagaggcgggtgagc
tacttctacgagccgtcaatcggagactactactacgggcagggacacccgatgaagccc
cacagaatcaggatggcacacaacctgatcgtgcactactccctccaccggcgcatggag
atcaacaggcccttcccagcagcccccgacgacatccgcctcttccactccaacgactac
gttgacttcctggcctccgtcacccctgagaccctccacgatcacacccacgcccgccat
ctcaagcgcttcaacgtcggcgaggactgtcctgtcttcgacggccttttctccttctgc
cagtcctccgctggcggatccatcggcgccgccgtcaaactcaatcgtcaggacgccgac
atcgccatcaactgggccggcggtttgcaccacgccaagaagtccgaggcctctggcttt
tgctacgtcaatgacatcgttttgggcatccttgagctcctcaaggttcacaggcgtgta
ctgtatgtagacatcgatgtccaccatggagatggtgttgaggaggcattttttaccaca
gatagggtgatgacggtgtctttccataaatttggagacttctttcctggcactgggcat
attaaagacattggggtactgggtggtaagtattatgcactaaatgttcccttaaatgat
ggattggatgatgggagcttccgtggtctatttcaacctatcatccaaaaggttatggag
gtttatcagccagatgcagttgttctccaatgtggagctgattcattgtctggtgataga
ttggggtgtttcaacttgtctgtgaaaggccatgcagattgccttcgttttcttagatct
ttcaatgtccctctaatggttttgggtgggggaggctatacaattcggaatgttgcccgc
tgttggtgctatgagacagcagttgctgttggggtagaacctgataataaattgccttac
aatgagtattatgaatactttggcccagattacactcttcatgttgaaccaagctctgtg
gagaacttgaactccgccaaagatttggaaaaaataaggaccatgctacttgagcaactt
tccagattgccacatgcacccagtgtatcatttcaaacgacacctccgactacacaagtt
ccggaagaggtggtagaacatatggatcgaagaccaaaacaacgcatatggaatggtgag
gattatgagtctgatgctgatgaagatgagaagcctcgacatcagagcttgaactttaat
cctcgccccattgcaaatgctgaaatgagggatattgcagatggaatcaaagaagagaat
atgacagaggcatatccgccatcctga

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