Camellia sinensis (tea plant): 114259166
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Entry
114259166 CDS
T07364
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03030
DNA replication
csin03410
Base excision repair
csin03420
Nucleotide excision repair
csin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114259166
03410 Base excision repair
114259166
03420 Nucleotide excision repair
114259166
03430 Mismatch repair
114259166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csin03032
]
114259166
03036 Chromosome and associated proteins [BR:
csin03036
]
114259166
03400 DNA repair and recombination proteins [BR:
csin03400
]
114259166
DNA replication proteins [BR:
csin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114259166
DNA Replication Termination Factors
ELG1-RFC complex
114259166
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114259166
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114259166
Check point factors
HRAD17(Rad24)-RFC complex
114259166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Viral_helicase1
Rad17
RCF1-5-like_lid
RuvB_N
AAA_24
AAA_11
AAA_5
AAA_25
AAA_assoc_2
AAA_19
nSTAND3
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_28
ABC_tran
AAA_30
AAA_18
MeaB
IstB_IS21
RNA_helicase
bpMoxR
NTPase_1
AAA_3
AAA_7
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
114259166
NCBI-ProteinID:
XP_028054964
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MASSSSSSSGHAYEIPWVEKYRPSKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTG
KTTSILALAHELLGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVIILD
EADSMTSGAQQALRRTMEIYSNSTRFALACNISSKIIEPIQSRCALVRFARLSDQEILSR
LMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPL
HVKNMVRNVLEGKFDDACAALKQLYDLGYSPTDIITTLFRIIKNFDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLALVRETAKAA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcctcttcatcatcatcgggacatgcgtacgaaattccatgggtagagaag
tacagaccctccaaagtgtccgacattgttggcaacgaagacgccgtctctcggcttcaa
gtcatcgctcgcgacggcaacatgcccaacctcatcttagccggtcctcctggaactggt
aaaaccactagtatattagctcttgcacatgagctgttgggaccaaattgtaaggaggct
gtgttagagctaaatgcatcagatgacaggggaattgatgttgtcagaaacaaaattaag
atgtttgcccaaaagaaagttacactaccccctgggagacacaaagtaatcatattggat
gaagctgacagcatgacttctggagcacaacaagccttgaggcggacgatggaaatatat
tctaactccacccgttttgctcttgcttgcaatatttcctctaaaattattgagcctatc
cagagtagatgtgcccttgtccgatttgcaagattatctgatcaagaaattcttagtcgt
ctcatggtggtggtggaagcagaaaaggttccttatgtcccagaaggccttgaagcaatc
attttcactgctgatggtgatatgaggcaggcattgaataacttgcaagctacatacagt
ggattccggtttgtcaatcaagaaaatgttttcaaggtttgtgaccagcctcatccattg
catgtgaagaatatggtacgaaatgtactagaagggaaatttgacgatgcttgtgctgct
ttaaagcagctctatgatttgggctactctcccactgacataatcacaaccctttttcga
attatcaagaactttgatatggctgagtatctgaaattggagttcatgaaggaaactgga
tttgcacatatgagaatctgtgatggagttggttcatatcttcagctttgtgggttgctg
gctaagcttgcactagtccgggaaactgctaaagctgcataa
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