Entry |
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Name |
(RefSeq) rRNA biogenesis protein RRP5 isoform X1
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KO |
K14792 | rRNA biogenesis protein RRP5 |
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Organism |
csin Camellia sinensis (tea plant)
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Brite |
KEGG Orthology (KO) [BR:csin00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:csin03009]
114259240
Ribosome biogenesis [BR:csin03009]
Eukaryotic type
90S particles
Other 90S particles
114259240
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
1950 aa
MARPSKKLSNKKSEQKFQKPSKKSFKPTSKTDETQVLAMQLQDDVPDFPRATARGGGRSS
LGKEVDEVDCDDVDMEFESGKRELNNNYYKNKNKRLQKRNHSAEEDDLGSLFGDGISGKL
PRFANKITLKNISPGMKLWGVIAEVNEKDIVISLPRGLRGLVRASEAFDPISDNKVKDVE
TNFLSSIYHVGQLVSCIVLQLGDDKKEKGKRKIWLSLRLALLHKTLTLDVIREGMVITAY
VKSIEDHGYILHFGLPSFTGFMSKNSQAESREIRVNIGQLLQGVVKSVDKTRKVVYLSSD
PDVVSKCVTKELKGISIDLLIPGMMVNARVQSTLENGIMLSFLTYFTGTVDIFHLQKAFP
TSNWKDDYNQNKKVNARILFIDPFTRAVGLTLNPHLVHNKAPPFLVKTGDIFDHSKVIRV
DRGFGLLLEVPTSPIPTPAYVSVSDVADKDVRKLEKNFKQGSHVRARILGFRHLEGLAMG
VLKSSAFEGSVFTHSDVKPGMVVRAKVTVVDNFGAIVQFPSGVKALCPLRHMSEFEIAKP
RKKFQVGAELQFRVLGCKSKRITVTHKKTLLKSKLGIVSSYADATEGLITHGWITKIENH
GCFVRFYNGVQGFASRSELGLEPGDDPTSLYHVEQVVKCRVTSSVPASRRINLSFVITPA
RVTDDDVAKLGTIVSGVVERVTPHAAIVRVNAKGYTKGTISAEHLSDHQGLVGLMKSVLK
PGYEFDQLLVLDAESNNLILTAKYSLIKSAKQLPAEVSQICPHSVIHGYVCNLIESGCFV
RYIERLTGFAPRSKATDDRRTNLSEAFYIGQSVRSYILDVSSETGRVTLSLKQSLCSSTD
ASFIQEYFLLEEKIAKLQLSDSKSLGLNWVEDFSIGSVVEGKVSDVKDFGVVVSFEKYDD
VFGFVTHYQLGGITVETGSIVRAVVLDVAKIEHLVDLSLRAAFVDILREETSKVDINKKK
RKKESHKELEVHQTVDAMVEIVKDTYLVLSIPQYNFAVGYASLTDYNTQKFPPRQYVNGQ
SVIATIMALPSPATAGRLLLLLKSVSEVTETSSSKRAKKKSGYDVGAVVQAEITEIKTLE
LKLKFGSGFHGRVHITEANDDNAVENPFKDFRIGQTLTAVIVSKTNKSENNRKNYQWELS
IRPSLVTGSTEMGGKLGNEDFSYSIGQHVTGFVYKLDSEWIWLTISRHVKAQLYILDSSH
EPTELQEFQKRYTVGKAISGYILSANKEKKLLRFVLRPIYSAPDRTLGCETIKIDDTSNH
LNGNVSYHIHEGDVVGGRISKILPGVGGMLIKIDPHHYGKVHFTELTNLWVSDPLSGYHE
GQFVKCKVLEISHSVKGTFQVDLSLRTTSDGIHSQKSTTVNNSELNNTVYFASRVESIED
LHPKMNVQGYVKNITPKGCFIMLSRKLDAKILLSNLSDGYVENLEKEFPIGKLVVGKVAS
VEPLSKRVEVTLRTSNASKTQKSDRNGLNSLHVGDIVSGQIKRIESYGLFITIDHTNTVG
LCHISELSDDHVDNIETKYRAGERVTSKVLKVDEDRQRVSLGMKNSYFMSNFDIQAPSKQ
KYDDAIEEKDHMVGTQLTMLPDRGSLGMQNLDFECENGQHLLLAEVEARASILPLEVPLD
DIEKSDMVNAACQNIEHVDDADADAVDQKNKSQAKKKANEERMEIVLLREREIRAAEERL
LEKDIPRSADEFEKVVRISPNSSFVWIKYMAFMLSLADVEKARSIAERALKTINIREESE
KLNVWVAYFNLENEYGYPPEDAVSKIFGRALQYCDPKKVHLALLGMYERTEQHKLVDELL
NKMSKKFKHSCKVWLRRIQWILNQNQDEVQSIVKRAVVCLPRHKHIKFLSQAAILEFKCG
VPDRGRSMFEGMLREYPKRTDLWSIYLDQEIRLGDVDVIRALFERATSLSLPPKRMKFLF
KKYLEYEKSVGDDEERIESVKRKAMEYVEG |
NT seq |
5853 nt +upstreamnt +downstreamnt
atggcacgaccttccaagaaactttcaaacaagaaatctgagcagaaattccagaagcca
tctaagaaatcattcaagcccacaagtaaaacagacgaaacacaagtattggctatgcaa
ctccaagacgacgtccctgacttccccagagccactgccagaggtggtggaagaagttca
cttgggaaagaagtcgatgaagttgattgcgatgatgttgatatggagtttgaatcagga
aagagggagttgaataataattattataagaataagaataaaaggctacaaaagcgaaat
cattcagcagaagaggatgatttgggttctctttttggtgatggcatttctggaaaacta
cctaggtttgccaataagatcaccttgaagaatatttctcctggaatgaagctttgggga
gtcattgctgaagtaaatgagaaagatatcgtaattagtcttccaaggggcttgcgtgga
ttagttcgtgcaagtgaagcatttgatcctatttcagataataaagtgaaggatgtggag
actaattttctttctagcatttatcatgttgggcaactggtttcttgcattgtactgcaa
ttgggtgacgataagaaagagaaggggaaacgaaagatctggctttctttgcgtcttgct
ttgttgcataagaccttaaccttggatgttattcgagaaggaatggttatcactgcatat
gtgaagagcattgaagaccacggctatatacttcattttggattgccttcatttactggg
tttatgtcgaaaaacagtcaagctgaaagcagggaaattagggtcaatattggacaactt
ttacaaggggttgtcaaaagcgtcgacaaaactcgtaaagtagtttatctgagttctgac
cctgatgtggtgtctaaatgtgtgaccaaggagcttaaaggcatttcaattgatcttctc
attccgggcatgatggttaatgcacgtgtacaatcaacccttgaaaacggaatcatgtta
tcattccttacgtactttacgggaactgttgacatatttcacttgcaaaaagcattccct
acttcaaattggaaagatgattacaatcaaaataagaaggtcaatgctcggatattattc
attgatcccttcactagagctgttggtttgactctgaatcctcaccttgtccataacaag
gctccaccttttcttgttaaaactggagatatctttgaccattcaaaagtaatcagggtg
gatagaggattcggtcttctacttgaggtccctacttctccaatcccaactccagcatat
gtcagtgtatctgatgtcgctgacaaggatgttaggaaattggaaaaaaacttcaagcaa
gggagccatgttcgtgctcggattcttggatttaggcacttggaagggctcgctatgggt
gttttaaagagtagtgcctttgaaggttcagttttcactcactccgatgtgaagcctggc
atggtggtaagagctaaagtaactgttgtggacaattttggggccattgttcaatttccc
agtggtgtcaaggcactttgtccccttcgacatatgtcagagtttgaaatagcaaagcct
agaaaaaagtttcaggttggagctgaactacagttccgtgtgcttggatgcaagtccaag
agaatcactgttactcacaagaaaacactattgaaatcaaagcttggaattgttagttca
tatgctgatgctactgaaggattaataacacatggatggataaccaagatcgaaaaccat
ggatgctttgtgcgattttacaatggagtacagggatttgcctcaagatctgagcttggt
ttagaacctggtgatgacccaacttcgctgtatcatgttgaacaagttgtcaaatgcaga
gttacaagttctgttcctgcttcacggcgcatcaacctgagttttgttattacacctgca
cgggttactgatgatgatgtggccaagttgggcactattgtttctggagtggttgagcga
gtaacccctcatgcagcaatagtacgtgtcaatgcaaaaggttacaccaagggtacaatt
tctgcagaacatttgtcagatcaccaagggcttgtgggtttgatgaaatctgtcttgaag
ccaggatatgagtttgatcaactattggttcttgacgctgagagcaacaatttaattctc
actgcaaagtattcacttattaaatctgctaaacagcttcctgcagaagtttctcaaatt
tgtcctcactcagtaatccatgggtatgtgtgtaacttgattgaatctggttgttttgtt
cgatatattgagcgtttaactggttttgctcctagaagcaaggcaacggatgaccgaaga
actaatctttctgaagccttctacattgggcaatctgttcgcagttacatacttgatgtt
agtagcgagactggcagagtaacattatctttgaagcaatcattatgctcttcgacggat
gcatcctttatccaagaatactttctcttggaagaaaagattgctaagctgcagttatct
gactcaaaaagtcttgggttaaattgggttgaagattttagcattggcagtgttgttgaa
ggaaaagttagtgatgtgaaagattttggagttgtcgtcagctttgaaaagtatgatgat
gtttttggttttgttacgcactatcagttaggtggaattactgtggaaactgggtccatc
gttcgagctgtggttcttgatgttgccaagattgaacaccttgtggatttgtctttaagg
gcagcatttgttgatatattgagagaagaaacttctaaagttgatattaacaagaagaaa
cgcaaaaaggaatcacacaaagaactggaggtacatcaaactgttgatgccatggtggag
attgtgaaagatacttacttggttctgtcaataccacaatataactttgctgttggatat
gcctcactgaccgactacaacacacaaaagttccctcccagacaatatgttaatggtcaa
agtgtcattgccaccatcatggctttgccaagccctgcaacagctgggaggttgctgttg
ctacttaaatctgtaagtgaggttacagagacttctagttcaaaaagagcaaaaaagaag
tctggctatgatgtgggagctgttgttcaggcagagattactgaaataaagactttggaa
ctgaaattgaaatttggatctggtttccatgggagggtacatatcacagaggcaaatgat
gataatgctgtcgaaaatccctttaaagacttcagaattggacaaacactgaccgcagta
attgtttcaaagaccaataaatcagaaaataataggaaaaactatcagtgggaattgtct
atcagaccttcactcgttacaggttctacagaaatgggaggcaagcttggcaatgaagat
ttcagttactcaattgggcaacatgtaactggatttgtctataaattggatagtgaatgg
atctggttaacaatatctcgacatgtgaaggctcagctctacattcttgacagttcacat
gaacctactgaacttcaggaattccagaagcgctatactgtggggaaagcaatatctggt
tatattttaagtgctaataaggagaaaaagctgttacgtttcgtgctgcgtccaatttat
tctgctcctgatagaacacttggttgtgaaactattaagatagatgacacaagcaatcac
ttgaatgggaatgtatcataccatattcacgaaggtgatgttgtgggcggcaggatttcc
aaaattcttcctggtgtgggtggaatgctcatcaaaatagatccacaccattatggaaag
gtccattttactgaattgacgaacttatgggtttctgacccattgtctggatatcatgag
ggacaatttgtcaaatgcaaagtcctagaaatcagccattcagttaagggaactttccag
gttgatttgtcattacgcacaacttcagatggcattcattctcagaagtctactactgtc
aacaacagtgaactcaacaacactgtatattttgcaagccgtgtagaaagtatagaggat
cttcatcctaagatgaatgtgcagggctatgttaagaacatcacaccaaagggatgcttc
attatgctttctcggaagctcgatgcgaaaatccttctctcaaacttgtccgatggctat
gttgaaaatctcgaaaaagaattccctattgggaaacttgttgttggcaaggtggcatct
gtggagcctttgtctaagcgagttgaagtcacccttaggacatcaaatgcaagcaaaaca
caaaaaagtgacagaaatggtttaaatagtctccatgttggagatattgtttctggccag
attaagcgcattgaatcatacggtttgtttatcacaattgatcatacaaacacagttgga
ttatgccatatttccgagctttctgatgatcatgttgacaatattgaaactaaatacaga
gcaggggagagagttacatcaaaggttttgaaggtggatgaggatagacaacgagtttct
cttgggatgaagaattcatattttatgagcaattttgacattcaagctccttcaaagcag
aagtatgatgatgccattgaggaaaaagatcacatggtgggtactcagttaacaatgttg
ccagatagaggctcattggggatgcagaatttggactttgaatgtgaaaatgggcagcat
cttcttcttgctgaagtggaagcgagggcttctattcttccacttgaggtccctctcgat
gatatagagaaatcagacatggttaatgctgcttgtcaaaatatagagcacgttgatgat
gctgatgctgatgctgtagatcaaaagaataaaagccaggcaaagaagaaagccaatgaa
gagagaatggaaattgttctgctcagggaacgagaaattagggctgctgaagaaaggcta
ttagagaaagatattccaagaagtgctgatgaatttgagaaagtggttagaatttcccca
aatagcagctttgtctggataaagtacatggcatttatgctttctttggctgatgttgag
aaagcccgctcaattgctgagagggctttgaagacaataaacatccgagaagaatctgaa
aagttgaatgtatgggtggcttattttaatttagagaatgaatatggatatcctccagag
gacgccgtttcaaaaatatttggaagagcattgcagtattgtgatcccaaaaaggtgcat
ctggcactgttgggtatgtatgaaaggactgagcaacacaagttggttgacgagcttctc
aacaaaatgagcaagaaattcaagcattcatgcaaggtttggttaaggcggattcagtgg
attttgaatcaaaatcaggatgaagttcagtctattgtaaaacgagctgttgtatgcctt
ccccggcataagcacattaagttcctctcgcaagcagctattctagagttcaaatgtggg
gttcctgatagagggcgatccatgtttgagggaatgcttcgcgagtacccaaagagaaca
gatttgtggagcatttatcttgatcaagaaattcgacttggtgatgtggatgtgattcgt
gcattatttgagagggcaacaagtttgagccttccacctaaaaggatgaagttcttattc
aaaaagtatttggagtatgaaaagtctgtaggtgatgatgaagaaaggattgaatctgtt
aagaggaaggcgatggaatatgttgaggggtag |