Camellia sinensis (tea plant): 114259356
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Entry
114259356 CDS
T07364
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114259356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114259356
03041 Spliceosome [BR:
csin03041
]
114259356
03036 Chromosome and associated proteins [BR:
csin03036
]
114259356
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114259356
Spliceosome [BR:
csin03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
114259356
Complex B
114259356
Complex C
U2 SnRNP specific factors
114259356
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
114259356
TFTC complex
114259356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
114259356
NCBI-ProteinID:
XP_028055166
LinkDB
All DBs
Position
Unknown
AA seq
1419 aa
AA seq
DB search
MRPQRERCSSGCPRPHSLSFLQRCCLRQVELIVDQASLAFIMLHLLAGIWSEIKRKKKGE
KKIENFESHYVPINEETSIELVIIDDDGIAQSICEQPVFGTIKDLIILPWNEKFHARSPQ
MMGKDLLVVISDSGKLSFLTFSNEMHRFFPLTHVQLSAHGNSRHQVGRMLAVDSTGCFIA
ASAFEDRLAMFSVSMSAGSDIIDKRIFYPSDNEGDSSTARGLTSISGTIWSMCFISRDFR
HASKEHYPVLAILLNRRGSFLNELLLLEWNTREHAVDMISQYEDAGSLAHNVVEVPHSYG
FAILFRVGDALLMDLRDTHNPCCVYRMSFSVLPTAVEEQNFVEESCRVHDPDEIFNVAAS
ALLELSDMVKDDDPMSIDGDCRNVKSTLKRVCSWSWEPGNGKNPRMIFCVDSGELFMIEI
SSHSDGPRIDPSECLYKSLPCKALLWVEGGFLAALVEMGDGMVLKLEDGRLFYRSPIQNI
APILDMSVMDYHDEKHDQMFACCGMAPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTVK
MKVIDSYHSFLVLSFVEQTRVLSVGLSFTDVTDTVGFQPDVCTLACGLVSDGVLVQVYQN
AVRLCFPTTAAHPEGILSSSPICTLWSPDNISFSLGAVGHNLILVTTSSPSFLFVLGVRY
LSVCHCEVFEMHRVRLQNELSCISIPQRHFEQKPSTSRGNMVPKSLVDTLPDGVDIGNTF
VIGTHKPSVEILSFATDKGLRVLAVGTISLTNTTGTAISGCVPQDVRLVFVDRLYILSGL
RNGMLLRFEWPAASTMSSLVSSSQRSCGSSCLVNLDASSLKDTGPQICAFDLFEKYKDNS
VPLQLVAIRRIGITPAFLIPLSDSLDADIIALSDRPWLLQTARHSLSYTSMSFQPSTHVT
PVCSVECPKGILFVAESSLHLVEMVHTKRLNVQKFHLGGTPRKVLYHSESRLLLVMRTEL
GRDSYLSDICCVDPLSGSVLSSFRLDPGETGKSMELVRVGNEQVLVIGTSLSAGAVMMPS
GEAESSTRGRLIVLCLEHVQNSDCASMTFCQKAGSSSQRTSPFREIVGYAAEQLSSSSLC
SSPDDTSCDGIKLEETEAWHLRLAYSTTWLGMVLAVCPYLDRYFLASAGNAFYVCGFPND
NSQRVRRLAVGKTRFMIMTLTAHFTRIAVGDCRDGILFYTYHEDARKLEQLYCDPVQRLV
ADCILMDVDTAVVSDRKGSFTVLSCSNQSEDTINFVDLQEVHVADNASPERNLTRSCSFY
IGEIAMSIRKGSFSYKLPADDILKGCDVANTIIDLSHNSVMASTLIGSIIVFIPISREEH
ELLEAVQARLAVHPLTAPILGNDHNEFRSRESSAGVPKILDGDMLAQFLELTNMQQEAVL
ALPLGSPDRVMFNSKPSSPVPITVNQVVRLLERVHYALN
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcagagggagcgttgttcttcaggttgtccaaggccacattcgctctccttc
ctccaacgatgttgtcttcggcaagtggagttgatcgttgatcaggcttcattagccttt
attatgctgcatttgctggccgggatatggtcagaaattaaaagaaaaaaaaaaggagaa
aaaaaaattgaaaattttgaatctcactatgtgccaataaatgaggagacatccatagaa
ttggttataatcgatgatgatggaattgcacaatccatctgtgagcagcctgtatttggc
acaataaaagatctcatcattctaccatggaatgagaagttccatgcaagaagcccacag
atgatggggaaagatcttctggttgttatttctgattcgggaaagctctcgttcctcaca
ttttctaatgaaatgcacaggtttttcccattgacacacgttcaactttctgctcatggc
aactcaaggcatcaagttggaaggatgctggctgttgattctactggctgcttcattgct
gctagtgcatttgaggatcgattggctatgttctcagtttcaatgtctgctggcagtgat
atcattgataagagaatattttatccttctgataatgaaggagactcaagtactgccaga
ggtctcaccagtatttctggtactatatggagcatgtgctttatttctagagattttcgt
cacgcaagtaaggagcactaccctgtattagccattctactgaataggaggggttctttc
ctgaatgagcttttgttattggaatggaatactagggaacatgctgttgatatgatttct
cagtatgaagatgctggatctctagcacataatgtggttgaagttcctcattcttatgga
tttgccattttgttcagggttggtgatgctctcttaatggatctcagggatactcacaac
ccttgttgtgtctatagaatgagctttagtgttttacctactgcagtggaggagcagaat
tttgttgaagaatcatgtagagtacatgatcctgatgaaatatttaatgttgctgcctct
gctttactggagctaagtgacatggttaaagatgatgatcccatgagtatagatggagat
tgtcgcaatgtcaaatcaaccttgaaacgtgtgtgctcatggagctgggaaccaggaaat
ggaaaaaatccaaggatgatattttgtgtagatagtggagaactttttatgattgaaatt
tcttctcattctgatggccctagaattgatccatctgaatgtctctacaaaagtttgcca
tgcaaagcactcttgtgggttgaaggtggatttttggctgcgcttgttgagatgggagat
gggatggtcttgaagttggaagatggaaggctgttttacagaagtcctattcaaaacatt
gcaccaatcttagatatgtcagtcatggattaccatgatgagaagcatgatcaaatgttt
gcctgctgtgggatggcaccagagggatctttgaggattattcgaagtggcatcagtgta
gaaaagcttttgagaactgcccctatttatcagggcataactggtacctggacagtaaaa
atgaaagtaattgattcttatcattctttcctagtgctatcatttgttgaacaaacaagg
gtgctgtcagttggcttaagctttacagacgtgaccgatacagttggtttccagcctgat
gtctgtaccttggcatgtggccttgtgagtgatggtgtgctggtccaggtataccaaaat
gcagttagactttgttttcctactactgccgcccaccctgaaggtattctttcatcgtct
ccaatttgtacactctggtcacctgataatatcagtttcagtctgggggcagttggacat
aatttgatacttgttactacttccagtccaagcttcttatttgttcttggggtcagatat
ctatcagtgtgtcactgtgaagtatttgagatgcatcgtgtgagattgcagaatgaattg
tcctgcatatctatccctcagaggcattttgagcagaaaccatcaacgtctcgtggtaat
atggtgcctaagagtcttgtagatacccttccggatggagttgacattggtaataccttt
gttatcggtacacataagccttcagtggaaattttgtcttttgcaactgataaaggtcta
agagttctagctgtggggaccatttctttaacaaacactacaggaactgctattagtggc
tgtgtccctcaagatgtaaggctcgtatttgttgatcgactttatattctttcaggattg
aggaatggaatgttacttcgatttgagtggcctgctgcctccacaatgtcctcattagtg
tcgtccagtcagcggagttgtggcagttcctgtttggtaaacttggatgcttcctcatta
aaagatacagggccccaaatttgtgcttttgatttatttgagaagtataaggacaattct
gtgcctctacagttagttgcaatacgccgcattggcattactcctgctttcctgattcca
ttgagtgattctcttgatgctgacataatcgctctgagtgataggccttggttattgcaa
actgctaggcatagcctttcatatacatccatgtcctttcaaccttcaacacatgtaact
cctgtttgttcagttgaatgccccaaaggaattttgtttgttgcagagagcagtcttcat
ttggtggaaatggtgcacaccaagaggcttaatgtgcagaagttccatctcggaggaaca
cctcggaaggttttatatcatagtgaaagtaggttgttgcttgtaatgaggactgaattg
ggccgtgattcatatttatctgatatatgctgtgtagatccgctcagtgggtcagtttta
tcatcttttagacttgatcctggggaaacaggaaagtccatggagttggtgagggttgga
aatgaacaagttttggtgattggaactagtctgtctgctggtgcagttatgatgcccagt
ggtgaagctgaaagcagtactaggggccgtttgattgtcctctgccttgaacatgtgcaa
aactcagattgtgcttctatgacattttgtcaaaaggctggttcatcttctcaacgaact
tctccttttcgtgaaattgttgggtatgctgctgaacagttatcaagcagtagtctttgc
agcagcccagatgatactagttgtgatggaatcaagcttgaagaaactgaagcatggcat
ctgaggttagcttattcgaccacatggcttggaatggtacttgctgtctgcccttacctt
gatcgttatttcttggcatccgctggtaatgctttttatgtttgtggttttccaaatgat
aattcccaaagggtgagaagattggctgtaggaaagacacgctttatgataatgactttg
actgctcactttactagaattgctgttggtgattgccgtgatggcatccttttctatacc
tatcatgaggatgccaggaaactggagcaactttactgtgatcctgttcagaggttggta
gctgactgtattcttatggatgttgataccgctgttgtttcagatcgtaaggggagtttc
actgtcttgtcatgttcaaatcagtcagaagatactattaattttgttgatttacaagaa
gtacatgttgcagataatgcaagtccagaacgcaacttaacacggagttgttcattctat
ataggtgagatagccatgagcatcaggaagggttcattttcttacaagcttccagccgat
gacatactgaagggttgtgatgttgctaatacaattattgatttgtcgcataatagtgtt
atggccagtacactaataggaagcataattgtcttcattcctatatcaagggaagaacat
gaacttttagaagctgtgcaagctagactggcggttcatccactgactgcgcctattctt
ggaaatgatcataatgagtttcgcagccgtgaaagttcggctggagtaccaaagatactt
gacggtgatatgcttgctcagttcttggagcttacaaatatgcaacaagaggctgtactg
gcattaccacttggctcaccagatagggttatgtttaattcaaagccctcttcacctgtg
ccaattactgttaaccaggtcgtgcggcttcttgaacgagttcattatgccctaaattga
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