Camellia sinensis (tea plant): 114259437
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Entry
114259437 CDS
T07364
Name
(RefSeq) DNA repair protein RAD4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
114259437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114259437
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
114259437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
114259437
NCBI-ProteinID:
XP_028055256
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MHTLTWSTTVSINRPCFYTPSQPRLSVETVRSSGWTGTPSLPFPALVVSSIDRSNLEKAM
RTRNQSKRHNQSTGEQVMEPVEGSNSLESLNEDGTLTAISHEAVGKLLKRVNARGLSALK
KQDNYLRQCDLASKSESLSEKTDEHGVAKRNKENALDGAGCSSDAIQSTPSKDTVEGKAF
HHTNPDSEEELDESFWEDGSLHILNSVNNFQKDLVNGVTIEFEGTPDSGKRKTIRRASAE
DKELAELVHKVHLLCLLGRGRLIDNACNDPLIQASLLSLLPKHLLRISEVTKLTVNALAP
LVSWFHNNFHIRSPSSTERSFHSALAFALETREGTAEEVAALSVALFRALNLTTRFVSIL
DVASLKPDTDKSESVRNDASKAGKGIFHSSTLMVARPNQVSISPVKQSSSDDKGNICETS
SRGACRAKNSKSSRNSSQSKDTPIADQSTLASEEPNELSDMCLTKKSKEESKRKGDLEFE
MQLEMALSTTAVGTSRSSMILDANDIHNNSENLSSPAKRMKTIKTVESPSSQGISTAFGS
RKVGAPLYWAEVYCSGENLTGKWVHVDAVNAIIDGEQKVEPAAAACKTSLRYAVAFAGLG
AKDVTRRYCMKWYKIASQRVDPIWWGTILAPLKELESGATGGVIHLEQDDSNGQEKVGAF
KISDSLGQNCILADAAILPGQLAMEVPKEACKKLGAESPARNPIIASRSSLEDMDLETRA
LTEPLPTNQQAYKTHHLYALERWLNKYQILHPKGPILGFCSGHPVYPRTCVQILHTKQRW
LREGLQVKANELPAKVLKRSLKLSKAQTSEADDHGEEGCEGNIVLYGKWQTEPLCLPHAV
NGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVAPVAKRLDIDFAPAMVGFEFRNGRSLPV
FEGIVVCAEFKDAVLEAYAEEEERREAEEKKRSEAQAILRWYQLLSSIVTRQRLNNCYGD
GLASQTCNDIPQTNDKVSAQVGCSEDDRHSPGCLELNVLDRKLDVKSMVPTEEEHEHAFL
TDDQAFDEESFTRTKRCRCGFSIQVEEM
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcatacattaacttggagcaccactgtttccataaacaggccctgtttttacactcca
tcacagcccaggctatcggtcgagaccgtacgctcttcggggtggaccggtacaccttcc
cttcccttcccggctctcgtggtctcttccatcgatcgatcaaacttggaaaaggctatg
cgaaccagaaaccaatccaagcgacacaaccaatccactggtgaacaagtgatggaacca
gtggaaggctcaaactctttggaatctcttaatgaagatggcactcttactgccatatca
catgaggctgtaggaaagcttttaaaacgagtgaatgcacgtggcttgtcagctttgaag
aaacaagataactatctccgtcagtgtgatcttgcaagcaaatcggaaagtctgtctgag
aagactgatgaacatggtgtagcaaagaggaataaagaaaatgccttagatggtgcaggt
tgtagtagtgatgcaatacaaagcactccatcgaaagacacggttgaagggaaagcattc
catcacactaatcctgatagtgaagaagaattggacgagtcattttgggaagatggttct
cttcatattttgaattctgtaaacaattttcaaaaagacttagttaatggagtgactata
gaatttgaggggaccccagattctggtaaacggaagactattcgtcgagcttctgctgaa
gataaggaattggccgagcttgtgcacaaggtgcatttactttgtttacttggacgagga
aggttgattgacaatgcttgtaatgatcctctcattcaggcttccttactttcacttcta
ccaaaacacttgctgaggatatcagaggtcacaaaattgacagttaatgcactggctcca
cttgtcagttggtttcacaataatttccatattagaagtccaagcagtacagagagatca
tttcattcagctttggcatttgcgctcgagactcgtgaagggactgcagaggaggttgct
gcattgtctgtggcgctatttagagctctgaaccttacaacccggtttgtgtccattttg
gatgtggcctccttgaaacctgatactgacaaatctgaatctgttagaaacgatgcaagc
aaagcaggtaagggcatatttcactcttccacactgatggtggctagaccaaatcaggtt
tctatttctcccgtgaaacaatcatcatcagatgacaagggcaacatctgtgaaacttcc
tcaaggggtgcatgcagagctaagaatagcaagtcatcaagaaattcctctcaatccaaa
gatactccaattgctgatcagtctacgttagcttcggaggaaccaaatgaattatctgat
atgtgcctgaccaagaaatcaaaagaggaatccaagagaaaaggggatcttgagtttgag
atgcagttggaaatggctctttctaccacagcagttgggacttctagaagcagtatgatc
ttggatgcaaatgacattcataataattcagaaaatctctcgtctcctgctaaaagaatg
aaaacaattaaaacggtagaatctccgtcttctcagggaatttctactgcatttggatca
agaaaagtcggagctcctctatattgggcagaagtctactgcagtggagagaacttgaca
ggaaagtgggtgcatgttgatgctgtcaatgctattattgatggagaacagaaagtagaa
cctgcggctgctgcgtgcaaaacatctttgagatatgcagttgcttttgctggacttgga
gctaaagatgtgacccgcaggtattgcatgaaatggtacaagatagcatcacaacgagtt
gatccaatttggtggggcaccattttggccccattgaaggagttggagtccggagcaact
ggaggagtgatccatttggagcaggatgattcaaatggacaagagaaagtaggagcattt
aaaatttctgattctctaggtcaaaactgtattctagcagatgctgccatcttgcccggg
cagctagcaatggaagtgccaaaagaggcttgtaagaaactgggtgcagagtctcctgca
aggaatcctattattgctagcaggagctctcttgaggacatggacttggaaactagggca
ttaactgagcctcttccaactaatcaacaggcctacaaaacccatcacctttatgctctt
gaaagatggcttaataagtatcagatacttcatccaaaggggcctatattgggattttgt
tcaggtcatccagtctacccaaggacttgtgtccaaatactccatacaaaacaaagatgg
ctgcgtgaggggctgcaagtcaaagccaatgagcttcctgcaaaggtgttgaagcgttct
ctgaaactcagcaaagcacaaacttctgaagctgatgatcatggtgaagagggttgtgaa
gggaatattgtgctttatgggaagtggcaaacagaacctttgtgtctgcctcatgctgtc
aatgggattgttcctaagaatgaacgtggccaagtggatgtgtggtccgagaagtgcctg
ccaccaggaactgtgcacttaaggttgccacgggtggctcctgttgcaaagaggctggac
attgattttgcacctgctatggttggatttgaattccgaaatggtcgctctttacctgtc
tttgagggcattgtggtttgtgctgagtttaaggatgcggttttagaggcatatgcagag
gaagaagaaagaagagaggctgaagagaagaaaaggagcgaagcgcaagctattcttagg
tggtatcagcttctctcatccattgttacccggcaaaggttgaataactgttatggggat
ggtttggcgtcacaaacctgcaatgacattccgcaaacaaatgataaagttagtgcacag
gttggttgtagtgaggatgacaggcattctcctggatgtttggaactgaatgtattggac
agaaagttggatgttaagtcaatggtgcccacagaagaagaacacgagcatgcatttttg
acagatgatcaggcttttgatgaagagagttttacgaggacaaagcgatgtcgttgtggt
ttttctattcaagtggaggaaatgtag
DBGET
integrated database retrieval system